BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_K15
(1219 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 38 0.037
BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p pro... 31 2.4
AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA... 31 2.4
BT011407-1|AAR96199.1| 669|Drosophila melanogaster AT20168p pro... 29 9.7
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 9.7
AY069106-1|AAL39251.1| 763|Drosophila melanogaster GH12404p pro... 29 9.7
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 9.7
AE014297-450|ABI31144.1| 669|Drosophila melanogaster CG33097-PB... 29 9.7
AE014297-449|AAF54130.2| 763|Drosophila melanogaster CG33097-PA... 29 9.7
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 9.7
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 37.5 bits (83), Expect = 0.037
Identities = 45/201 (22%), Positives = 50/201 (24%), Gaps = 1/201 (0%)
Frame = +3
Query: 378 PXTADPTTTHNNXXQPXXNXXLGXXXXKXPCRNXPPXTPHTTXXXQTTPRPHPXRXXXPH 557
P T PTT P N L + P PP TP T P P P
Sbjct: 285 PPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATYLPP 344
Query: 558 XXIXTPPAKS-PCTPXQRRPKPAXLXXKTRXAXXKRTPXXTNRPXXTXPNNPPXXXXXRX 734
PP + TP RP P T A P P T
Sbjct: 345 TNKPPPPVTTRRPTPPPTRPPPPPTRAST-PAPTYLPPTNKPLPPVTVRTTVRTTPRPTP 403
Query: 735 NKXAPXNRRXHRXXXXPXKXNXRATXXPXXQETPPXTARTXPQXRXAXXXTPSAQSEXRX 914
P R P R P T P T P TP
Sbjct: 404 PPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTR 463
Query: 915 *XTXPTXXQ*NPSPSTXXXPP 977
T P + +P+ PP
Sbjct: 464 PPTYPPTTRRLTTPAPTYLPP 484
Score = 35.1 bits (77), Expect = 0.20
Identities = 56/271 (20%), Positives = 69/271 (25%), Gaps = 3/271 (1%)
Frame = +3
Query: 378 PXTADPTT--THNNXXQPXXNXXLGXXXXKXPCRNXPPXTPHTTXXXQTTPRPHPXRXXX 551
P T PT T P N L + P PP TP T P P
Sbjct: 197 PPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTRPPTTRPPATYL 256
Query: 552 PHXXIXTPPAKSPCTPXQRRPK-PAXLXXKTRXAXXKRTPXXTNRPXXTXPNNPPXXXXX 728
P PP + P P+ P TR + P T P P PP
Sbjct: 257 PPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTR--PPATYLPPTNKP-LPPVTTRL 313
Query: 729 RXNKXAPXNRRXHRXXXXPXKXNXRATXXPXXQETPPXTARTXPQXRXAXXXTPSAQSEX 908
P R P AT P + PP P P ++
Sbjct: 314 PPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPPVTTRRPTPPPTRPPPPPTRAST 373
Query: 909 RX*XTXPTXXQ*NPSPSTXXXPPXSXATXXPGXGGPXTQXXRXLXPQXREASXMPRXXXP 1088
P + P P T + P P T+ P + P P
Sbjct: 374 PAPTYLPPTNKPLP-PVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPPPTVRTTRP---PP 429
Query: 1089 XSDXDSXXXXTSXXXTADASPTKRTPXPXXP 1181
T+ T+ TP P P
Sbjct: 430 PPTRPPTKPPTTYLPPVTVRTTRATPPPTRP 460
Score = 29.5 bits (63), Expect = 9.7
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Frame = +3
Query: 459 KXPCRNXPPXTPHTTXXXQTTPRPHPXRXXXPHXXIXTPPAKSPCTPXQR--RPKPAXLX 632
K P PP T TT RP P R P PP TP P L
Sbjct: 540 KPPTTYLPPVTVRTTRATPPPTRP-PTRPPTPPPTRPPPPPTRASTPAPTYLPPTNKPLP 598
Query: 633 XKTRXAXXKRTPXXTNRPXXTXPNNPP 713
T + TP T P P PP
Sbjct: 599 PVTVRTTVRTTPRPT-LPPTKPPTRPP 624
>BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p
protein.
Length = 175
Score = 31.5 bits (68), Expect = 2.4
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = +3
Query: 480 PPXTPHTTXXXQTTPRPHPXRXXXP-----HXXIXTPPAKSPCTPXQRRPKPAXLXXKTR 644
PP P TT TTP P P P T PA +P P P T
Sbjct: 77 PPPPPTTTTTTTTTPAPTPAPTYLPPPPPTTTTTTTTPAPTPAPTYLPPPPPPPRTTTTT 136
Query: 645 XAXXKRTPXXTNRPXXTXPNNP 710
TP T P P P
Sbjct: 137 TTTTTTTPAPTPVPTYLPPPPP 158
>AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA
protein.
Length = 172
Score = 31.5 bits (68), Expect = 2.4
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = +3
Query: 480 PPXTPHTTXXXQTTPRPHPXRXXXP-----HXXIXTPPAKSPCTPXQRRPKPAXLXXKTR 644
PP P TT TTP P P P T PA +P P P T
Sbjct: 74 PPPPPTTTTTTTTTPAPTPAPTYLPPPPPTTTTTTTTPAPTPAPTYLPPPPPPPRTTTTT 133
Query: 645 XAXXKRTPXXTNRPXXTXPNNP 710
TP T P P P
Sbjct: 134 TTTTTTTPAPTPVPTYLPPPPP 155
>BT011407-1|AAR96199.1| 669|Drosophila melanogaster AT20168p protein.
Length = 669
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 1072 HXEXXPPPTQIAPXXXHPPXXXRTQAPP 1155
H PPP AP PP R Q PP
Sbjct: 193 HLMSQPPPNAAAPLLSQPPPNVRQQPPP 220
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.5 bits (63), Expect = 9.7
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +3
Query: 513 QTTPRPHPXRXXXPHXXIXTPPAKSPCTPXQRRPKPAXLXXKTRXAXXKR--TPXXTN-R 683
++T P P I TPP K P +P P R A R TP N R
Sbjct: 120 ESTTSKDPSAWFKPDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAPNNRRTTPATQNSR 179
Query: 684 PXXTXPNN 707
P T P +
Sbjct: 180 PSSTIPQS 187
>AY069106-1|AAL39251.1| 763|Drosophila melanogaster GH12404p protein.
Length = 763
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 1072 HXEXXPPPTQIAPXXXHPPXXXRTQAPP 1155
H PPP AP PP R Q PP
Sbjct: 193 HLMSQPPPNAAAPLLSQPPPNVRQQPPP 220
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.5 bits (63), Expect = 9.7
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +3
Query: 513 QTTPRPHPXRXXXPHXXIXTPPAKSPCTPXQRRPKPAXLXXKTRXAXXKR--TPXXTN-R 683
++T P P I TPP K P +P P R A R TP N R
Sbjct: 120 ESTTSKDPSAWFKPDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAPNNRRTTPATQNSR 179
Query: 684 PXXTXPNN 707
P T P +
Sbjct: 180 PSSTIPQS 187
>AE014297-450|ABI31144.1| 669|Drosophila melanogaster CG33097-PB,
isoform B protein.
Length = 669
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 1072 HXEXXPPPTQIAPXXXHPPXXXRTQAPP 1155
H PPP AP PP R Q PP
Sbjct: 193 HLMSQPPPNAAAPLLSQPPPNVRQQPPP 220
>AE014297-449|AAF54130.2| 763|Drosophila melanogaster CG33097-PA,
isoform A protein.
Length = 763
Score = 29.5 bits (63), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 1072 HXEXXPPPTQIAPXXXHPPXXXRTQAPP 1155
H PPP AP PP R Q PP
Sbjct: 193 HLMSQPPPNAAAPLLSQPPPNVRQQPPP 220
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.5 bits (63), Expect = 9.7
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +3
Query: 513 QTTPRPHPXRXXXPHXXIXTPPAKSPCTPXQRRPKPAXLXXKTRXAXXKR--TPXXTN-R 683
++T P P I TPP K P +P P R A R TP N R
Sbjct: 120 ESTTSKDPSAWFKPDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAPNNRRTTPATQNSR 179
Query: 684 PXXTXPNN 707
P T P +
Sbjct: 180 PSSTIPQS 187
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.317 0.133 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,110,036
Number of Sequences: 53049
Number of extensions: 516223
Number of successful extensions: 2080
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6478647390
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -