Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_K14
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1250 - 25183375-25183815                                         60   2e-09
03_04_0027 + 16593133-16593573                                         58   1e-08
02_01_0563 + 4134954-4135388                                           56   5e-08

>07_03_1250 - 25183375-25183815
          Length = 146

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 29/96 (30%), Positives = 50/96 (52%)
 Frame = +2

Query: 230 YFGKLGMRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXX 409
           YFGK+GMR FH  +NK + P +N+++LW++V  +   + A A  GK P++++ +      
Sbjct: 52  YFGKVGMRYFHRLRNKFYSPAVNVERLWSMVPAEQAAEAAGA--GKAPLLDVTQFGYFKV 109

Query: 410 XXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 517
                 P++P++V                GGA VL+
Sbjct: 110 LGKGLLPEKPIVVKAKLISKVAEKKIKAAGGAVVLT 145



 Score = 54.8 bits (126), Expect = 9e-08
 Identities = 26/51 (50%), Positives = 27/51 (52%)
 Frame = +1

Query: 76  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 228
           M TS +K RK RGHVS                 NAGG HHHRI  DKYHPG
Sbjct: 1   MTTSLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG 51


>03_04_0027 + 16593133-16593573
          Length = 146

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = +2

Query: 230 YFGKLGMRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK-AXXXX 406
           YFGK+GMR FH   N+  CP +N+++LW++V      K A A  GK PVI++ +      
Sbjct: 52  YFGKVGMRYFHKLSNRFHCPAVNVERLWSMVPTD---KAAEAGAGKAPVIDVTQFGYTKV 108

Query: 407 XXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 517
                  P++P++V                GGA +L+
Sbjct: 109 LGKGMLPPQRPIVVKAKLISKVAEKKIKAAGGAVLLT 145



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 26/51 (50%), Positives = 26/51 (50%)
 Frame = +1

Query: 76  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 228
           M T  KK RK RGHVS                 NAGG HHHRI  DKYHPG
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG 51


>02_01_0563 + 4134954-4135388
          Length = 144

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = +2

Query: 230 YFGKLGMRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK-AXXXX 406
           YFGK+GMR FH   N+  CP +N+++LW++V  +     A A  GK PVI++ +      
Sbjct: 52  YFGKVGMRYFHRLSNRFHCPAVNVERLWSMVPAE-----AGAGAGKAPVIDVTQFGYTKV 106

Query: 407 XXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLS 517
                  P++P++V                GGA +L+
Sbjct: 107 LGKGMLPPERPIVVKAKLISKVAEKKIKAAGGAVLLT 143



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 26/51 (50%), Positives = 26/51 (50%)
 Frame = +1

Query: 76  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 228
           M T  KK RK RGHVS                 NAGG HHHRI  DKYHPG
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,521,934
Number of Sequences: 37544
Number of extensions: 331387
Number of successful extensions: 822
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)