Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_K13
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    30   2.0  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    30   2.0  
Z72509-1|CAA96645.1|  339|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z70212-7|CAA94167.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = +2

Query: 335   FGSKGIDLNQISQKL--ETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVNKNS 508
             F +K +  +  S  L   TL SK+T +    +  S++   +KN+ +  + + + E +   
Sbjct: 11169 FEAKHLGSSSASDSLAESTLRSKKTKKG--EVEKSELSIDMKNQDKTTLATTLLEDDLAK 11226

Query: 509   LQTTEDQKWEHMLSEWNKEKIKL 577
               + E+ + EH+++  NKEK  L
Sbjct: 11227 TTSAEESEAEHLVALQNKEKTSL 11249


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = +2

Query: 335   FGSKGIDLNQISQKL--ETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVNKNS 508
             F +K +  +  S  L   TL SK+T +    +  S++   +KN+ +  + + + E +   
Sbjct: 11169 FEAKHLGSSSASDSLAESTLRSKKTKKG--EVEKSELSIDMKNQDKTTLATTLLEDDLAK 11226

Query: 509   LQTTEDQKWEHMLSEWNKEKIKL 577
               + E+ + EH+++  NKEK  L
Sbjct: 11227 TTSAEESEAEHLVALQNKEKTSL 11249


>Z72509-1|CAA96645.1|  339|Caenorhabditis elegans Hypothetical
           protein F32G8.1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -1

Query: 313 VSARLYYSRVKFLGGLENLPLKNVQLSAILHYLQSQSLTVLLVEVVY*ILHLPF*SIRVL 134
           + A L+Y   K    + N+ +KN+  + I   L S  L  L+V V+Y I + P  S+ V 
Sbjct: 114 IPATLFYKYTK----VTNINMKNITKNQIRMILLSSYLLSLIVGVIYVITYEPDESLEVA 169

Query: 133 NE 128
           +E
Sbjct: 170 SE 171


>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
           protein H40L08.3 protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 79  KSQTITNNN*IQIKFVFHSKREYSKMGDEGFSKLLQQAEQLTTEIEG-NEELPRVERSLV 255
           K +TI+N   +      H KR+Y  M ++   K  +Q E+   EI+   ++  R  R ++
Sbjct: 754 KQRTISNLKGLYEDESTHQKRKYETMIEDQIRKSFRQLEEKQNEIKTIKDDAERKHRDMI 813

Query: 256 AS 261
            S
Sbjct: 814 GS 815


>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
           protein H40L08.3 protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 79  KSQTITNNN*IQIKFVFHSKREYSKMGDEGFSKLLQQAEQLTTEIEG-NEELPRVERSLV 255
           K +TI+N   +      H KR+Y  M ++   K  +Q E+   EI+   ++  R  R ++
Sbjct: 754 KQRTISNLKGLYEDESTHQKRKYETMIEDQIRKSFRQLEEKQNEIKTIKDDAERKHRDMI 813

Query: 256 AS 261
            S
Sbjct: 814 GS 815


>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
           protein F40F11.2b protein.
          Length = 1607

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 377 LETLSSKRTFEPLQPIADSDIESFLKN 457
           LET S +R  E  + +AD D+ +FL+N
Sbjct: 769 LETESERRKLEDDKKLADQDLSTFLRN 795


>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
           protein F40F11.2a protein.
          Length = 1593

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 377 LETLSSKRTFEPLQPIADSDIESFLKN 457
           LET S +R  E  + +AD D+ +FL+N
Sbjct: 755 LETESERRKLEDDKKLADQDLSTFLRN 781


>Z70212-7|CAA94167.1|  332|Caenorhabditis elegans Hypothetical
           protein R04D3.9 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 548 RACVPIFDPLLFVGNFC*LHQ*GII*HFLFHSSKNFQYLNQLL 420
           R  + +FDPL+F+ + C   Q  +I   + HS KN   L  +L
Sbjct: 3   REILTVFDPLVFIVSLC--FQSTLIYTIIRHSPKNISTLKSIL 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,329,111
Number of Sequences: 27780
Number of extensions: 306368
Number of successful extensions: 797
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)