Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_K11
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    26   0.53 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.53 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   2.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   4.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   4.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.5  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -2

Query: 699 CVGCIFALLISKASWYAFCESSTTECLVSPVATSARY 589
           C  CI   + S   W  +C S+   C+ +  +   R+
Sbjct: 35  CRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 71


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -2

Query: 699 CVGCIFALLISKASWYAFCESSTTECLVSPVATSARY 589
           C  CI   + S   W  +C S+   C+ +  +   R+
Sbjct: 483 CRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 519


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 370 GTYDILISN*KEVPLLVAKFDAGFRHFLHRGRHV 269
           G +D+ + + + V  L     A F    HRG H+
Sbjct: 183 GAFDVTLESGERVTFLDTPGHAAFISMRHRGAHI 216


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 60  PLAPQPSKPVYQFSAREKLILC 125
           PL P  S P++   A   L++C
Sbjct: 205 PLQPVVSDPIFDKKAMSDLVIC 226



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/63 (20%), Positives = 32/63 (50%)
 Frame = +2

Query: 404 EQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDY 583
           E++T  +E+  +M K Y   ++KE +++  ++      + +  A   ++   + K K D+
Sbjct: 441 EKRTIENEQLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIF-KDKSDW 499

Query: 584 YRY 592
           + Y
Sbjct: 500 FDY 502


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 60  PLAPQPSKPVYQFSAREKLILC 125
           PL P  S P++   A   L++C
Sbjct: 205 PLQPVVSDPIFDKKAMSDLVIC 226


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 44  DFFGFPSGPAAVKASISVQRKRKTDIVLKF 133
           D +G  +GP A+K+ +        D+ ++F
Sbjct: 612 DGWGGKAGPCAIKSVVPSDESHWNDLAMEF 641


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 44  DFFGFPSGPAAVKASISVQRKRKTDIVLKF 133
           D +G  +GP A+K+ +        D+ ++F
Sbjct: 650 DGWGGKAGPCAIKSVVPSDESHWNDLAMEF 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,893
Number of Sequences: 438
Number of extensions: 5170
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)