Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_K08
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 373 e-104
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 373 e-104
AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical... 54 1e-07
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 42 8e-04
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 39 0.006
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 39 0.006
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.052
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 31 1.5
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 30 1.9
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 29 3.4
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 29 3.4
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 29 3.4
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 29 4.5
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 29 5.9
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 373 bits (918), Expect = e-104
Identities = 160/222 (72%), Positives = 196/222 (88%)
Frame = +2
Query: 140 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 319
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 320 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 499
L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63 LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122
Query: 500 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGK 679
SLYRCK LKRAALGRM ++KRQ ++ YLEQVRQHL+RLPSIDP TRT+I+CGFPNVGK
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGK 182
Query: 680 SSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTP 805
SSFIN +TRADVEVQPYAFTTK+LYVGH DY++LRWQVIDTP
Sbjct: 183 SSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTP 224
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 832 ERNVIEMQAXTALAHLRS 885
+RN IEMQA TALAHL++
Sbjct: 233 DRNTIEMQAVTALAHLKA 250
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 373 bits (918), Expect = e-104
Identities = 160/222 (72%), Positives = 196/222 (88%)
Frame = +2
Query: 140 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 319
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 320 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 499
L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63 LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122
Query: 500 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGK 679
SLYRCK LKRAALGRM ++KRQ ++ YLEQVRQHL+RLPSIDP TRT+I+CGFPNVGK
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGK 182
Query: 680 SSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTP 805
SSFIN +TRADVEVQPYAFTTK+LYVGH DY++LRWQVIDTP
Sbjct: 183 SSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTP 224
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 832 ERNVIEMQAXTALAHLRS 885
+RN IEMQA TALAHL++
Sbjct: 233 DRNTIEMQAVTALAHLKA 250
>AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical
protein T07A9.9c protein.
Length = 53
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2
Query: 485 LKYGDSLYRCKQLKRAALGRMATIMKRQGANLTYLE 592
+KY DSLYRCK LKRAALGRM ++KRQ ++ YL+
Sbjct: 1 MKYADSLYRCKMLKRAALGRMVKLLKRQKSSFEYLK 36
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 647 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPWNL-GSS 823
+ + GFP+VGKS+ ++ +T E Y FTT + G Y Q++D P + G+S
Sbjct: 65 VAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEGAS 124
Query: 824 IGK 832
GK
Sbjct: 125 QGK 127
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 653 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK-YLRWQVIDTP 805
+ GFPN GKSS + I+RA +V Y FTT ++G Y+ + + V D P
Sbjct: 193 LVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYEDFEQIAVADIP 244
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 659 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPWNL-GSSIGK 832
GFP+VGKS+ + + EV Y FTT + G YK + Q++D P + G+ GK
Sbjct: 69 GFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGK 127
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 659 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPWNL-GSSIGK 832
GFP+VGKS+ + + EV Y FTT + G YK + Q++D P + G+ GK
Sbjct: 69 GFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGK 127
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.052
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 653 ICGFPNVGKSSFINKITRADVEVQPYAFTT 742
I G PNVGKS+F N +T+++ + + + F T
Sbjct: 26 ILGLPNVGKSTFFNVLTKSEAQAENFPFCT 55
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 653 ICGFPNVGKSSFINK-ITRADVEVQPYAFTT 742
+ GFPN GKS+ + + V++ YAFTT
Sbjct: 166 LLGFPNAGKSTLLKALVPEKSVKIADYAFTT 196
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +2
Query: 212 TQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNV 391
T T + HK + + G + Q+F + R FP L + F +++ +
Sbjct: 124 TYPTTELLGHKILLANNLYGVETHPKTHRIQSFSAVILRFFLTFPNLKPMTDFEHEIVKL 183
Query: 392 LYDKDHYKLGLGQLNTARHLIDNVAKDYVRLL 487
+YD Y L GQ+ + DN+ + VR L
Sbjct: 184 VYDSGKYPLIYGQVAS-----DNLVAEEVRRL 210
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 653 ICGFPNVGKSSFINKITR 706
+ GFPNVGKSS IN + R
Sbjct: 264 VVGFPNVGKSSVINSLKR 281
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 605 HLARLPSIDPYTRTIIICGFPNVGKSSFINKI 700
H++ PS P ++ G+PNVGKSS INK+
Sbjct: 120 HVSDEPSAKPVMVGMV--GYPNVGKSSTINKL 149
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 605 HLARLPSIDPYTRTIIICGFPNVGKSSFINKI 700
H++ PS P ++ G+PNVGKSS INK+
Sbjct: 120 HVSDEPSAKPVMVGMV--GYPNVGKSSTINKL 149
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 605 HLARLPSIDPYTRTIIICGFPNVGKSSFINKI 700
H++ PS P ++ G+PNVGKSS INK+
Sbjct: 289 HVSDEPSAKPVMVGMV--GYPNVGKSSTINKL 318
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 659 GFPNVGKSSFINKITRADV-EVQPYAFTTK 745
G+PNVGKSS +N + + V + P A TK
Sbjct: 332 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 361
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 659 GFPNVGKSSFINKITRADV-EVQPYAFTTK 745
G+PNVGKSS +N + + V + P A TK
Sbjct: 273 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 302
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 659 GFPNVGKSSFINKITRADV-EVQPYAFTTK 745
G+PNVGKSS +N + + V + P A TK
Sbjct: 332 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 361
>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
protein F47A4.5 protein.
Length = 1071
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 338 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDN 460
+FPK + Y D+++ D +H+ + G++ T HL+DN
Sbjct: 256 QFPKAELA---YYDIVSTDVDDEHFVIVAGKVTTDEHLMDN 293
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 668 NVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPWN 811
N+G NK ++AD ++ Y T + L + D ++ W I WN
Sbjct: 79 NLGAVEKYNK-SKADAFIKQYKDTKQELDFSYDDLYFVYWNTIQLIWN 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,777,700
Number of Sequences: 27780
Number of extensions: 457987
Number of successful extensions: 1129
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -