Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_J23
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical pr...    55   6e-08
Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical pr...    55   6e-08
Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical pr...    54   1e-07
AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical ...    39   0.005
Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
 Frame = +2

Query: 458 LLDALEDVM-NTK-NIIFHHTKAHYKPPEKG---AAYPMHQDYHYFPYE-KDSMVASFLH 619
           ++D ++D++ N K N++  HT    KPP+ G   + +PMHQD  YFP+   D +  ++  
Sbjct: 103 VVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKLTSRHPMHQDLQYFPFRPADFICCAWTA 162

Query: 620 LDAADPKNGCLYVYPGSHK 676
           ++     NGCL V PG+HK
Sbjct: 163 MEKITRANGCLVVVPGTHK 181


>Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
 Frame = +2

Query: 458 LLDALEDVM-NTK-NIIFHHTKAHYKPPEKG---AAYPMHQDYHYFPYE-KDSMVASFLH 619
           ++D ++D++ N K N++  HT    KPP+ G   + +PMHQD  YFP+   D +  ++  
Sbjct: 103 VVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKLTSRHPMHQDLQYFPFRPADFICCAWTA 162

Query: 620 LDAADPKNGCLYVYPGSHK 676
           ++     NGCL V PG+HK
Sbjct: 163 MEKITRANGCLVVVPGTHK 181


>Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical
           protein ZK550.5 protein.
          Length = 328

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
 Frame = +2

Query: 428 VFSKFIFNDNLLDALEDVMNTKN--IIFHHTKAHYKPPEKGAA---YPMHQDYHYFPYEK 592
           V   +  N  + D + D++ + +  I   HT    KPP+ GA    +PMHQD  YFP+  
Sbjct: 109 VLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGALTSRHPMHQDLIYFPWRP 168

Query: 593 DSM-VASFLHLDAADPKNGCLYVYPGSHKLG------PQEDVGAKEGNFHFVDQKKSLYR 751
           + + V ++  ++  + +NGCL V PG+   G      P+ + G     +   D   SL R
Sbjct: 169 EELTVCAWTAMEKINKQNGCLQVVPGTQARGLQVHGYPEWEGGVNMAYYAIKDYDMSLPR 228

Query: 752 E 754
           E
Sbjct: 229 E 229


>AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical
           protein Y105C5B.9 protein.
          Length = 288

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +2

Query: 416 FHHAVFSKFIFNDNLLDALEDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYHYFPYEK- 592
           F    F K  FN  + +  +++   +  +       +K P+ G A   H D  +   +  
Sbjct: 102 FLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYI-FKQPKIGGAVTDHVDSTFLRVDPI 160

Query: 593 DSMVASFLHLDAADPKNGCLYVYPGSHK 676
           D +   ++ +D A  +NGCL   PGSHK
Sbjct: 161 DHLTGVWIAIDEASVENGCLSFIPGSHK 188


>Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical
           protein C05G5.1 protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -3

Query: 504 KIMFLVFITSSRASRRLSLKINLENTAWWXLKVVDAFHSKILVMFPV 364
           K+M + F  +  A+  LS+ IN E   WW +  +  F +    ++P+
Sbjct: 302 KVMKVSFCIAGVAAASLSICINYEGVQWWVILSIFIFGAAGFSIYPI 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,665,026
Number of Sequences: 27780
Number of extensions: 375368
Number of successful extensions: 901
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)