Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_J15
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
06_03_0219 - 18227559-18227858,18227864-18228340                       29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997...    28   8.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 524 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 682
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>06_03_0219 - 18227559-18227858,18227864-18228340
          Length = 258

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +1

Query: 655 SPVPTLPLTGYCPPFSLREAWRFLIAHAVCVSQFXCRSFAPSWAVCTNPPXQPDRCAL 828
           SP+P+LP+     P +L    R     A C +    R  APS     +PP  P R AL
Sbjct: 52  SPLPSLPVVPIHLPVALLSLPRCRPPPAACAASTVRRPAAPS-PPPASPPPPPPRLAL 108


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 304 NESAN---ARGEAVCVLGALPLPRSLTRCAR 387
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_08_0911 -
           21499196-21499236,21499368-21499488,21499665-21499789,
           21500187-21500418,21500488-21500668,21501342-21501438,
           21501641-21501779,21502024-21502351,21502890-21503137,
           21503270-21503543,21504200-21504291,21504451-21504521,
           21505091-21505181,21506526-21507380,21507482-21507594,
           21508007-21508074,21508655-21508835,21509084-21509186,
           21509273-21509379,21510046-21511584,21511661-21511771,
           21511856-21511908,21511988-21512063,21512147-21512366,
           21512477-21512901,21513193-21513372,21513503-21515474
          Length = 2680

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 795 RAHSPAWSERPTPELRYTXSVS 730
           +AH+PAWS  P PE+  +  V+
Sbjct: 840 KAHAPAWSPLPRPEVAQSPEVT 861


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,629,613
Number of Sequences: 37544
Number of extensions: 519276
Number of successful extensions: 1483
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)