Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_J13
(977 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.005
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.005
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.005
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.025
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.025
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.077
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.077
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.077
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 35 0.10
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.31
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.31
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/102 (30%), Positives = 31/102 (30%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PPG P P P P PP PP GG P G P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPP-------------PPPPPGGLPPISGGPPPPP 762
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPPXXTXXXFXP 970
P GG PPP PPP G PPP F P
Sbjct: 763 PPPGGC---PPPPPPPPPGGFKGG------PPPPPPPGMFAP 795
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/84 (26%), Positives = 22/84 (26%)
Frame = +1
Query: 655 GXXPPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXX 834
G PP PP P P P P P PPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 835 XXPPXXGGXFXKTPPXXXPXXXXP 906
PP GG PP P P
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 755 PXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPP 895
P G PP G P P PP GG PPP PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP K P PP P PP GG P G P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 845 PXXG--GXXXKPPPXXPPP 895
P G PPP PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/102 (30%), Positives = 31/102 (30%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PPG P P P P PP PP GG P G P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPP-------------PPPPPGGLPPISGGPPPPP 762
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPPXXTXXXFXP 970
P GG PPP PPP G PPP F P
Sbjct: 763 PPPGGC---PPPPPPPPPGGFKGG------PPPPPPPGMFAP 795
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/84 (26%), Positives = 22/84 (26%)
Frame = +1
Query: 655 GXXPPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXX 834
G PP PP P P P P P PPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 835 XXPPXXGGXFXKTPPXXXPXXXXP 906
PP GG PP P P
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 755 PXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPP 895
P G PP G P P PP GG PPP PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP K P PP P PP GG P G P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 845 PXXG--GXXXKPPPXXPPP 895
P G PPP PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/102 (30%), Positives = 31/102 (30%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PPG P P P P PP PP GG P G P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPP-------------PPPPPGGLPPISGGPPPPP 345
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPPXXTXXXFXP 970
P GG PPP PPP G PPP F P
Sbjct: 346 PPPGGC---PPPPPPPPPGGFKGG------PPPPPPPGMFAP 378
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/84 (26%), Positives = 22/84 (26%)
Frame = +1
Query: 655 GXXPPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXX 834
G PP PP P P P P P PPP P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 835 XXPPXXGGXFXKTPPXXXPXXXXP 906
PP GG PP P P
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 755 PXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPP 895
P G PP G P P PP GG PPP PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP K P PP P PP GG P G P
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Query: 845 PXXG--GXXXKPPPXXPPP 895
P G PPP PPP
Sbjct: 330 PPGGLPPISGGPPPPPPPP 348
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.025
Identities = 28/101 (27%), Positives = 29/101 (28%), Gaps = 8/101 (7%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P PP P G P G P P P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP------PGMPGMPPPPPPSRFGP 327
Query: 845 PXXGGXXXKPPPXX--------PPPXXXXXXGKXXFXXPPP 943
P GG PPP PPP G + PPP
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 31.9 bits (69), Expect = 0.71
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 3/99 (3%)
Frame = +1
Query: 655 GXXPPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPPGXXXP---XPX 825
G PP PP P P P F P G PPPG P P
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP---PGMGGMPPPPPPGMRYPGGMPPP 350
Query: 826 XXXXXPPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPP 942
P G + PP P P G PP
Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPP---APPSGHGMIPPPPP 386
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 707 PXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXX 886
P P PP P P G P P P G PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP-- 319
Query: 887 PPPXXXXXXGKXXFXXPPP 943
PPP G PPP
Sbjct: 320 PPPSRFGPPGMGGMPPPPP 338
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +2
Query: 743 PPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPPXXXXXXGKX 922
PP P PP G P P PP G PPP PPP G
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRP-----PPPPSSGMW--PPP--PPPPPGRTPGPP 311
Query: 923 XFXXPPPXXTXXXFXPXG 976
PP F P G
Sbjct: 312 GMPGMPPPPPPSRFGPPG 329
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PPG+ P P P P R PP G PP G P P
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFG--PP-------GMGGMPPPPPPGMRYPGGMPPPPPP 353
Query: 845 --PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPP 940
P G PPP PP G PP
Sbjct: 354 RYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.025
Identities = 28/101 (27%), Positives = 29/101 (28%), Gaps = 8/101 (7%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P PP P G P G P P P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP------PGMPGMPPPPPPSRFGP 337
Query: 845 PXXGGXXXKPPPXX--------PPPXXXXXXGKXXFXXPPP 943
P GG PPP PPP G + PPP
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 31.9 bits (69), Expect = 0.71
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 3/99 (3%)
Frame = +1
Query: 655 GXXPPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPPGXXXP---XPX 825
G PP PP P P P F P G PPPG P P
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP---PGMGGMPPPPPPGMRYPGGMPPP 360
Query: 826 XXXXXPPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPP 942
P G + PP P P G PP
Sbjct: 361 PPPRYPSAGPGMYPPPPPSRPP---APPSGHGMIPPPPP 396
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 707 PXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXX 886
P P PP P P G P P P G PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP-- 329
Query: 887 PPPXXXXXXGKXXFXXPPP 943
PPP G PPP
Sbjct: 330 PPPSRFGPPGMGGMPPPPP 348
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +2
Query: 743 PPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPPXXXXXXGKX 922
PP P PP G P P PP G PPP PPP G
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRP-----PPPPSSGMW--PPP--PPPPPGRTPGPP 321
Query: 923 XFXXPPPXXTXXXFXPXG 976
PP F P G
Sbjct: 322 GMPGMPPPPPPSRFGPPG 339
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PPG+ P P P P R PP G PP G P P
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFG--PP-------GMGGMPPPPPPGMRYPGGMPPPPPP 363
Query: 845 --PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPP 940
P G PPP PP G PP
Sbjct: 364 RYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.077
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P PP A PP G P P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPP---------AAGSPPPPRTGSPPPPPTGSPPP 282
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPP 943
P GG P PPP PPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/101 (24%), Positives = 25/101 (24%), Gaps = 2/101 (1%)
Frame = +1
Query: 679 PPXXXXPXXPXPXXXXPX--KXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXXXXPPXX 852
PP P P P P P P G PPP P P PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-------PPPRTGSPPPPPTGSPPPPP 284
Query: 853 GGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
G P P P G PP P G
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/92 (25%), Positives = 24/92 (26%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P R PP P P GG P G P
Sbjct: 275 PPTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPP 940
P + P PP G PP
Sbjct: 332 PP---RQKRQAPERSPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.077
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P PP A PP G P P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPP---------AAGSPPPPRTGSPPPPPTGSPPP 303
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPP 943
P GG P PPP PPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/101 (24%), Positives = 25/101 (24%), Gaps = 2/101 (1%)
Frame = +1
Query: 679 PPXXXXPXXPXPXXXXPX--KXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXXXXPPXX 852
PP P P P P P P G PPP P P PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-------PPPRTGSPPPPPTGSPPPPP 305
Query: 853 GGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
G P P P G PP P G
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/92 (25%), Positives = 24/92 (26%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P R PP P P GG P G P
Sbjct: 296 PPTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPP 940
P + P PP G PP
Sbjct: 353 PP---RQKRQAPERSPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.077
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P PP A PP G P P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPP---------AAGSPPPPRTGSPPPPPTGSPPP 288
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPP 943
P GG P PPP PPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/101 (24%), Positives = 25/101 (24%), Gaps = 2/101 (1%)
Frame = +1
Query: 679 PPXXXXPXXPXPXXXXPX--KXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXXXXPPXX 852
PP P P P P P P G PPP P P PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-------PPPRTGSPPPPPTGSPPPPP 290
Query: 853 GGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
G P P P G PP P G
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/92 (25%), Positives = 24/92 (26%)
Frame = +2
Query: 665 PPGKXPXXXPXPXXPXPXXXXRXNXXPPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXP 844
PP P P P P R PP P P GG P G P
Sbjct: 281 PPTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 845 PXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPP 940
P + P PP G PP
Sbjct: 338 PP---RQKRQAPERSPPTGSPPTGSPPTGRPP 366
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.10
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEA 205
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 206 PP-SGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 249
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 176 PPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGA 235
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 236 PP-SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 279
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 280
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 281 PP-SGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSG 324
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 296 PPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 355
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 356 PP-SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 399
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 385
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 386 PP-SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 429
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 475
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 476 PP-SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 519
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 400
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 401 PP-SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 444
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 415
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 416 PP-SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 459
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 430
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 431 PP-SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 474
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 446 PP-SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 489
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/105 (25%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 461 PP-SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG 504
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 505
Query: 841 PPXXG--GXFXKT--PPXXXPXXXXP 906
PP G G F + PP P P
Sbjct: 506 PPSGGPPGPFDPSGAPPSGMPPVPLP 531
Score = 31.5 bits (68), Expect = 0.94
Identities = 24/104 (23%), Positives = 24/104 (23%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPPGXXXPXPXXXXXXP 843
PP PP P P P P P G G F P P
Sbjct: 161 PPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGA 220
Query: 844 PXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
P GG P P P P F P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG 264
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F P P P
Sbjct: 266 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGA 325
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 326 PP-SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 369
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P G G F PP P P
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 251 PP-SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 294
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P P G G F PP P P
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 310
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
P GG P P P P F P G
Sbjct: 311 QP-SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG 354
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 1/105 (0%)
Frame = +1
Query: 664 PPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXF-XXXPPPGXXXPXPXXXXXX 840
PP PP P P P P G G F PP P P
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 841 PPXXGGXFXKTPPXXXPXXXXPXXGXXXXXXXPPXXXXXXFXPXG 975
PP GG P P P P F P G
Sbjct: 341 PP-SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 384
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +2
Query: 746 PFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPPXXXXXXGKXX 925
P+ P PP G P P PP PPP PPP
Sbjct: 275 PYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRG 334
Query: 926 FXXPP 940
F PP
Sbjct: 335 FMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +2
Query: 746 PFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXXGGXXXKPPPXXPPPXXXXXXGKXX 925
P+ P PP G P P PP PPP PPP
Sbjct: 275 PYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRG 334
Query: 926 FXXPP 940
F PP
Sbjct: 335 FMPPP 339
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = -3
Query: 894 GGGXXGGGFXKXPPXXGGXXXXXPGXGXXPPXGGXXXKXAXPFXXXGXKGGXXFXRXXXX 715
GGG GGG PP G G G GG G GG
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Query: 714 GXGXXGXGXXXGXXPG 667
G G G G G G
Sbjct: 123 GCGGGGGGCGGGGGGG 138
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = -3
Query: 894 GGGXXGGGFXKXPPXXGGXXXXXPGXGXXPPXGGXXXKXAXPFXXXGXKGGXXFXRXXXX 715
GGG GGG PP G G G GG G GG
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Query: 714 GXGXXGXGXXXGXXPG 667
G G G G G G
Sbjct: 123 GCGGGGGGCGGGGGGG 138
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +2
Query: 743 PPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXX---GGXXXKPPPXXPPP 895
PP A PP GG P PP G PPP PPP
Sbjct: 203 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +2
Query: 743 PPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXX---GGXXXKPPPXXPPP 895
PP A PP GG P PP G PPP PPP
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +2
Query: 743 PPFXPXXXXGXAXXXXXPPXGGXXPXPGXXXXXPPXX---GGXXXKPPPXXPPP 895
PP A PP GG P PP G PPP PPP
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/92 (26%), Positives = 24/92 (26%)
Frame = -3
Query: 942 GGGXXXXXXPXXXXXXGGGXXGGGFXKXPPXXGGXXXXXPGXGXXPPXGGXXXKXAXPFX 763
GGG GGG GG PP G G G GG
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Query: 762 XXGXKGGXXFXRXXXXGXGXXGXGXXXGXXPG 667
G GG G G G G G G
Sbjct: 146 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = +2
Query: 794 PPXGGXXPXP----GXXXXXPPXXGGXXXKPPPXXPPPXXXXXXGKXXFXXPPPXXT 952
P GG P P G PP GG PP PP G PP T
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKT 134
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 803 GGXXPXPGXXXXXPPXXGGXXXKPPPXXPPPXXXXXXGK 919
GG P PP G PPP PPP G+
Sbjct: 30 GGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCGCGCGR 68
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +1
Query: 631 PGXXKXXXGXXPPXXXPPXXXXPXXPXPXXXXPXKXVPXFXPXXGKXXGXFXXXPPP 801
P G PP PP P P P P G+ G PPP
Sbjct: 717 PAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPP 773
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,826,571
Number of Sequences: 27780
Number of extensions: 279595
Number of successful extensions: 1171
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2542323834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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