Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_J12
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.35
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.61
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.1
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.1
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.2
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.2
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 3.2
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 3.2
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.2
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.2
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.3
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical p... 28 7.5
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 7.5
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 9.9
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 9.9
AY594354-1|AAT01444.1| 539|Caenorhabditis elegans cofactor-inde... 28 9.9
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.9
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 9.9
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 9.9
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 9.9
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 9.9
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 9.9
AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical... 28 9.9
AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical... 28 9.9
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 28 9.9
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 9.9
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 486 SVTPKTKPARKPPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP 665
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466
Query: 666 SNTT 677
+TT
Sbjct: 467 PSTT 470
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 495 PKTKPARKPPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 653
PKT+P P ++P CW+ F PPR N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 185 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 298
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 276 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 97
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 96 S 94
S
Sbjct: 136 S 136
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 239 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 409
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 410 TVKLINKRDHHALKLI 457
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 276 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 97
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 96 S 94
S
Sbjct: 136 S 136
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 549 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 677
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 546 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 683
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 231 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 79
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 231 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 79
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 231 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 79
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 231 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 79
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 533 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 676
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 271 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 107
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 263 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 352
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical
protein ZC239.4 protein.
Length = 231
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +2
Query: 491 DSKDKTSKKASWKFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFK 670
+S +KT A K P+LENN + +++ ++K L + +S D S D F
Sbjct: 103 ESDEKTINVA--KRLPILENNSQFLQVLCNQEKPILLI--VVMASRDHFFPNMSIPDGFN 158
Query: 671 HHWYLEPSMYESDVMF 718
+ ++E ++ + F
Sbjct: 159 AYKFVEKYSHQFHIYF 174
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 179 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 358
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 359 IV--KSYFPIQFRVI 397
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 143 ATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGK 307
AT +P + L ++ +V G E +A + EKK EV+ + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 203 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 382
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3825 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3879
Query: 383 QFRVIFTEQTVKLINKRDHHA 445
T ++ + + HA
Sbjct: 3880 LITTTPTNSSLHIGRLENSHA 3900
>AY594354-1|AAT01444.1| 539|Caenorhabditis elegans
cofactor-independent phosphoglyceratemutase protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = -1
Query: 841 YHAKSWDNRXLLRCAPXFTVFVGGHIFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEG 662
Y+A DNR R + +GG + V+ VV + + LK P++ +G
Sbjct: 211 YYAMDRDNRWE-RINVAYEAMIGG-VGETSDEAGVVEVVRKRYAADETDEFLK-PIILQG 267
Query: 661 VSGAITVDDTVITRTFRVIELQVLFVLGGHD 569
G + DDT+I +R ++ + G D
Sbjct: 268 EKGRVQNDDTIIFFDYRADRMREISAAMGMD 298
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 561 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 686
TS PP TNS+ S++ V+ ++S+ + L + T TL
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTL 264
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 203 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 382
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3778 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3832
Query: 383 QFRVIFTEQTVKLINKRDHHA 445
T ++ + + HA
Sbjct: 3833 LITTTPTNSSLHIGRLENSHA 3853
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 203 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 382
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 383 QFRVIFTEQTVKLINKRDHHA 445
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 203 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 382
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 383 QFRVIFTEQTVKLINKRDHHA 445
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 203 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 382
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4022 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4076
Query: 383 QFRVIFTEQTVKLINKRDHHA 445
T ++ + + HA
Sbjct: 4077 LITTTPTNSSLHIGRLENSHA 4097
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 486 SVTPKTKPARKPPGSLPP-CWKTTEFTSRSCPP 581
SVTP +P PP + PP T +T PP
Sbjct: 218 SVTPGGRPGSTPPATFPPGSVSTVRYTPGPTPP 250
>AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical
protein F57B10.3b protein.
Length = 521
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = -1
Query: 841 YHAKSWDNRXLLRCAPXFTVFVGGHIFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEG 662
Y+A DNR R + +GG + V+ VV + + LK P++ +G
Sbjct: 193 YYAMDRDNRWE-RINVAYEAMIGG-VGETSDEAGVVEVVRKRYAADETDEFLK-PIILQG 249
Query: 661 VSGAITVDDTVITRTFRVIELQVLFVLGGHD 569
G + DDT+I +R ++ + G D
Sbjct: 250 EKGRVQNDDTIIFFDYRADRMREISAAMGMD 280
>AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical
protein F57B10.3a protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = -1
Query: 841 YHAKSWDNRXLLRCAPXFTVFVGGHIFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEG 662
Y+A DNR R + +GG + V+ VV + + LK P++ +G
Sbjct: 211 YYAMDRDNRWE-RINVAYEAMIGG-VGETSDEAGVVEVVRKRYAADETDEFLK-PIILQG 267
Query: 661 VSGAITVDDTVITRTFRVIELQVLFVLGGHD 569
G + DDT+I +R ++ + G D
Sbjct: 268 EKGRVQNDDTIIFFDYRADRMREISAAMGMD 298
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 486 SVTPKTKPARKPPGSLPP-CWKTTEFTSRSCPP 581
SVTP +P PP + PP T +T PP
Sbjct: 141 SVTPGGRPGSTPPATFPPGSISTVRYTPGPTPP 173
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 203 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 382
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3794 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3848
Query: 383 QFRVIFTEQTVKLINKRDHHA 445
T ++ + + HA
Sbjct: 3849 LITTTPTNSSLHIGRLENSHA 3869
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,136,888
Number of Sequences: 27780
Number of extensions: 412936
Number of successful extensions: 1651
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -