Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_I19
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       24   8.8  
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979     24   9.7  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 23.8 bits (49), Expect(2) = 8.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1   PPPPPPP 21
           PPPPPPP
Sbjct: 313 PPPPPPP 319



 Score = 23.8 bits (49), Expect(2) = 8.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1   PPPPPPP 21
           PPPPPPP
Sbjct: 326 PPPPPPP 332



 Score = 22.6 bits (46), Expect(2) = 8.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 4   PPPPPPXK 27
           PPPPPP K
Sbjct: 326 PPPPPPPK 333



 Score = 22.6 bits (46), Expect(2) = 8.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 4   PPPPPPXK 27
           PPPPPP K
Sbjct: 353 PPPPPPPK 360


>06_02_0119 +
          12040476-12041273,12042767-12042834,12042931-12042979
          Length = 304

 Score = 23.8 bits (49), Expect(2) = 9.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1  PPPPPPP 21
          PPPPPPP
Sbjct: 56 PPPPPPP 62



 Score = 22.6 bits (46), Expect(2) = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 4   PPPPPPXK 27
           PPPPPP K
Sbjct: 85  PPPPPPQK 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,572,916
Number of Sequences: 37544
Number of extensions: 213266
Number of successful extensions: 9291
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3437
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)