Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_I17
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.6
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 4.7
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 4.7
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 6.3
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 8.3
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 8.3
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 28 8.3
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 28 8.3
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 28 8.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.3
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 174 PGAAETEAVAKTIANTKTKIFENFILYFREIETQRTSCNELNQNLKDS 31
P TE+ A +I+N IF + + +++E +RTS + NLK +
Sbjct: 387 PQLPSTESSAASISNASENIFNSSRIMPKQVEPERTSIPNGDYNLKST 434
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 354 PPAPPPPPPPPPPPPP 369
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 355 PAPPPPPPPPPPPPPP 370
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 72 PPPPPPPMPCPPPPPP 87
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 65 PPPPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 760 PPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 760 PPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 342 PPPPPPPGGCPPPPPP 357
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 343 PPPPPPGGCPPPPPPP 358
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP PPPPPP
Sbjct: 579 PPPPPPMLGGPPPPPP 594
Score = 25.4 bits (53), Expect(2) = 8.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 503 PPPXXEXPPPPP 468
PPP PPPPP
Sbjct: 535 PPPVSSIPPPPP 546
Score = 21.0 bits (42), Expect(2) = 8.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 482 PPPPPP 465
PPPPPP
Sbjct: 561 PPPPPP 566
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP E PPPPP
Sbjct: 296 PIPPPPIKEESPPPPP 311
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 512 PXXPPPXXEXPPPPPP 465
P PPP E PPPPP
Sbjct: 296 PIPPPPIKEESPPPPP 311
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 466 GGGGGGXSXXGGGXXGP 516
GGGGGG GGG GP
Sbjct: 247 GGGGGGYMRSGGGGGGP 263
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 515 GPXXPPPXXEXPPPPPP 465
GP PPP PPPPP
Sbjct: 94 GPPPPPPHYYTQPPPPP 110
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 503 PPPXXEXPPPPPP 465
PPP PPPPPP
Sbjct: 134 PPPPPSPPPPPPP 146
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 503 PPPXXEXPPPPPP 465
PPP PPPPPP
Sbjct: 785 PPPRASEPPPPPP 797
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 503 PPPXXEXPPPPPP 465
PPP PPPPPP
Sbjct: 256 PPPVLSIPPPPPP 268
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 503 PPPXXEXPPPPPP 465
PPP PPPPPP
Sbjct: 256 PPPVLSIPPPPPP 268
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 328 NIINVVTFCGI-I*ALSLSESFCFCQ--GVDCWSRADDGVSNPLTHF 197
N+I +F GI + ++S++ S F G+ CW R D S+ THF
Sbjct: 197 NVIYWPSFIGIMLDSMSINISLMFSAYFGIKCWLRMDAIFSSSSTHF 243
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 515 GPXXPPPXXEXPPPPPP 465
G PPP PPPPPP
Sbjct: 286 GGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 515 GPXXPPPXXEXPPPPPP 465
G PPP PPPPPP
Sbjct: 307 GGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 515 GPXXPPPXXEXPPPPPP 465
G PPP PPPPPP
Sbjct: 292 GGSPPPPRAGSPPPPPP 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,505,565
Number of Sequences: 27780
Number of extensions: 165137
Number of successful extensions: 2672
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2229
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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