Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_I14
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138...    28   7.8  

>11_01_0172 -
           1383568-1384440,1385336-1385401,1385470-1385505,
           1385604-1385743,1386978-1387134,1387245-1387418,
           1387540-1387790,1390296-1390446
          Length = 615

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
 Frame = -3

Query: 569 FPPPQXXXTKKXXXXXXXGG--GXXXF*XXGGG--PPPFXXLXXEKXXPRLXXPPPXIXP 402
           FPPP              GG  G   F    G   PPP          PRL  PPP   P
Sbjct: 506 FPPPPPPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPLLPNIMSAGFPRLSAPPPLPLP 565

Query: 401 XXXKN 387
              +N
Sbjct: 566 TQPQN 570


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,632,040
Number of Sequences: 37544
Number of extensions: 284096
Number of successful extensions: 542
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)