Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_I10
(1198 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 46 7e-05
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.008
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.008
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 37 0.032
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 36 0.057
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 36 0.075
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 35 0.099
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 35 0.099
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.23
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 33 0.30
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.40
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.40
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.40
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.40
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.53
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.53
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.53
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.70
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.70
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 0.92
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 32 0.92
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.92
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.8
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.8
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 4.9
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 4.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.5
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 6.5
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 8.6
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 45.6 bits (103), Expect = 7e-05
Identities = 29/112 (25%), Positives = 40/112 (35%)
Frame = +1
Query: 316 PXPEXXXXSXPXTXHHXTPPATXRXXHXXPEXPPXXTTXXPXXXRPPTTXTPPAXXTPXK 495
P + P TPP++ P+ PP +T P PP T PPA P
Sbjct: 267 PGKDANYCPCPQRQDDRTPPSSGTSA---PQPPPRGSTAAPGTRAPPATRAPPATRAPPA 323
Query: 496 PTXKQXGRPNPTXLXKXALRQPQTNXNTXPXPXXPXAPKXQPKXQ*TNPHXP 651
T P + +R+P+T + P P P P P +P P
Sbjct: 324 TTRAPPATTRPAPASQPPVREPETPDSGYPSP-APQEP-AHPSPSYPSPSYP 373
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 39.5 bits (88), Expect = 0.005
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GG CG GGG G CGGG G G
Sbjct: 78 GCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 138 GGGCGGGGGG 147
Score = 37.9 bits (84), Expect = 0.014
Identities = 27/70 (38%), Positives = 27/70 (38%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GGC G GGG G G CGGG GC G
Sbjct: 120 GGCGGGGGGCGGGCGGGGGGGCGGGGGGG----CGGGGGGCGGGGG--GCGGGGGGCG-G 172
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 173 GGGGGCGGGG 182
Score = 37.1 bits (82), Expect = 0.025
Identities = 26/67 (38%), Positives = 26/67 (38%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GGC G GGG G G CGGG GC G G G
Sbjct: 119 GGGCGGGGGGCGGGCG--GGGGGGCGGG-----GGGGCGGGGG--GCGGGGGGCGGGGGG 169
Query: 312 XGXGGXG 292
G GG G
Sbjct: 170 CGGGGGG 176
Score = 36.7 bits (81), Expect = 0.032
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GG CG GGG G G CGGG G G G
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGG------GGGGCGGGGGCGGGCAPPPPPPACGGG 121
Query: 312 XGXGGXG 292
G GG G
Sbjct: 122 CGGGGGG 128
Score = 35.9 bits (79), Expect = 0.057
Identities = 28/80 (35%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = -2
Query: 525 VXASXLFXGWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGG--GXXVVGC 352
V + LF GGG G GG CG GGG G CGG G GC
Sbjct: 14 VATAFLFPSGGGGGGGGGCGGGCGGGGG-CGGGGGCGGGCAPPPPPPACGGGCGGGGGGC 72
Query: 351 XXXGXXVXFRGXGXGXGGXG 292
G G G G GG G
Sbjct: 73 GGGGGGCG-GGGGCGGGGGG 91
Score = 34.7 bits (76), Expect = 0.13
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = -2
Query: 492 GGGXXGXXGGC---CGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
GGG G GGC C GGG G G GGG G G
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGG 154
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 155 GCGGGGGGCG 164
Score = 33.5 bits (73), Expect = 0.30
Identities = 23/57 (40%), Positives = 23/57 (40%)
Frame = -1
Query: 364 GGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXVGDVGGCG 194
GGG GG C G G G GG G G G C PP P A G GG G
Sbjct: 75 GGGGCGGGGGCG--GGGGGCGGGGGGCGGGGGCGGGCAPPPP---PPACGGGCGGGG 126
Score = 33.5 bits (73), Expect = 0.30
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GG G GG G G CGGG GC G
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGG--GCGGGGGGGCGG 180
Query: 321 GXGXGXGG 298
G G G GG
Sbjct: 181 GGGGGCGG 188
Score = 32.7 bits (71), Expect = 0.53
Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXV-VGXAXCGGGXXVVGCXXXGXXVXF 325
G G G G GG C GGG G G CGGG GC G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG---GCGGGGGGCGG 94
Query: 324 RGXGXGXGG 298
G G G GG
Sbjct: 95 GGGGCGGGG 103
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C G GGG GG G G G GG G G G CG G
Sbjct: 127 GGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGG---GCG---GGGGGGCGG 180
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 181 GGGGGCG 187
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C G GGG GG G G G GG G G G CG G
Sbjct: 120 GGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG---GCG----GGGGGCGG 172
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 173 GGGGGCG 179
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -1
Query: 364 GGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXVGDVGGCG 194
GGG GG C G G G GG G C PP G G GGCG
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGG-------CAPPPPPPACGGGCG-GGGGGCG 130
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.008
Identities = 26/67 (38%), Positives = 26/67 (38%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GGC G GGG G G CGGG GC G G G
Sbjct: 80 GGGCGGGGGGCGG-------GGGGCGGGGGCGGGGGGCGGGGG--GCGGGGGGCGGGGGG 130
Query: 312 XGXGGXG 292
G GG G
Sbjct: 131 CGGGGGG 137
Score = 37.9 bits (84), Expect = 0.014
Identities = 27/73 (36%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Frame = -2
Query: 492 GGGXXGXXGGC------CGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXV 331
GGG G GGC CG GGG G G CGGG GC G
Sbjct: 62 GGGGCGGGGGCAPPPAPCG--GGCGGGGGGCGGGGGGCGGGGGCGGGGG--GCGGGGGGC 117
Query: 330 XFRGXGXGXGGXG 292
G G G GG G
Sbjct: 118 GGGGGGCGGGGGG 130
Score = 37.1 bits (82), Expect = 0.025
Identities = 25/69 (36%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXV--VGXAXCGGGXXVVGCXXXGXXVXFRG 319
GGG G GGC G GGG G G CGGG GC G
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS-GGCGGGSSGGCGGG 158
Query: 318 XGXGXGGXG 292
G G GG G
Sbjct: 159 GGGGCGGGG 167
Score = 36.3 bits (80), Expect = 0.043
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GGC G GGG G G CGGG GC G G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGG------GGGGCGGGGG--GCGGGGGGGCGGGSS 144
Query: 312 XGXGG 298
G GG
Sbjct: 145 GGCGG 149
Score = 35.5 bits (78), Expect = 0.075
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C G GGG GG G G G GG G G G C G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG----- 149
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 150 GSSGGCG 156
Score = 33.5 bits (73), Expect = 0.30
Identities = 28/79 (35%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = -2
Query: 519 ASXLFXGWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXG 340
+S LF GGG G GG CG GGG G CGGG GC G
Sbjct: 18 SSFLFPSAGGGGGGGGCGGGCG-----GGCGGGGGCAPPPAPCGGGCGGGGG--GCGGGG 70
Query: 339 XXVXFR---GXGXGXGGXG 292
G G G GG G
Sbjct: 71 GCAPPPAPCGGGCGGGGGG 89
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/67 (34%), Positives = 23/67 (34%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C GGG GG C G G G GG G G C G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG----GGGGCGGGGGGCGGGGGGCG 125
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 126 GGGGGCG 132
Score = 32.3 bits (70), Expect = 0.70
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C G GGG GG G G G GG G G G CG G
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG---GCG---GGGGGGCGG 141
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 142 GSSGGCG 148
Score = 31.9 bits (69), Expect = 0.92
Identities = 26/70 (37%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXX---GGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
GGG G GGC G GGG G G CGGG GC G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGG------GGGGCGGGGG--GCGGGGGC---G 104
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 105 GGGGGCGGGG 114
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GG G + GGG G G C G G
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCG 91
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 92 GGGGGCGGGG 101
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/71 (35%), Positives = 25/71 (35%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GG CG GG G G CGGG GC G G G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG--GCGGGGG-GGCGGGGGG----GCG 172
Query: 312 XGXGGXGXVXV 280
G G G V
Sbjct: 173 GGSSGGGGYAV 183
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXV-VGCXXXGXXVXF 325
G GGG G GG CG GG G G GGG G G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVA 184
Query: 324 RGXGXGXGGXG 292
G G GG G
Sbjct: 185 PSGGGGCGGGG 195
Score = 30.7 bits (66), Expect = 2.1
Identities = 25/68 (36%), Positives = 25/68 (36%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GGC G GGG G CGGG GC G
Sbjct: 118 GGGGGGCGGGGGGCGG------GGGGGCGGG-----SSGGCGGGSS-GGCGGGGGGGCGG 165
Query: 321 GXGXGXGG 298
G G G GG
Sbjct: 166 GGGGGCGG 173
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.008
Identities = 26/67 (38%), Positives = 26/67 (38%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GGC G GGG G G CGGG GC G G G
Sbjct: 80 GGGCGGGGGGCGG-------GGGGCGGGGGCGGGGGGCGGGGG--GCGGGGGGCGGGGGG 130
Query: 312 XGXGGXG 292
G GG G
Sbjct: 131 CGGGGGG 137
Score = 37.9 bits (84), Expect = 0.014
Identities = 27/73 (36%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Frame = -2
Query: 492 GGGXXGXXGGC------CGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXV 331
GGG G GGC CG GGG G G CGGG GC G
Sbjct: 62 GGGGCGGGGGCAPPPAPCG--GGCGGGGGGCGGGGGGCGGGGGCGGGGG--GCGGGGGGC 117
Query: 330 XFRGXGXGXGGXG 292
G G G GG G
Sbjct: 118 GGGGGGCGGGGGG 130
Score = 37.1 bits (82), Expect = 0.025
Identities = 25/69 (36%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXV--VGXAXCGGGXXVVGCXXXGXXVXFRG 319
GGG G GGC G GGG G G CGGG GC G
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS-GGCGGGSSGGCGGG 158
Query: 318 XGXGXGGXG 292
G G GG G
Sbjct: 159 GGGGCGGGG 167
Score = 36.3 bits (80), Expect = 0.043
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GGC G GGG G G CGGG GC G G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGG------GGGGCGGGGG--GCGGGGGGGCGGGSS 144
Query: 312 XGXGG 298
G GG
Sbjct: 145 GGCGG 149
Score = 35.5 bits (78), Expect = 0.075
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C G GGG GG G G G GG G G G C G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG----- 149
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 150 GSSGGCG 156
Score = 33.5 bits (73), Expect = 0.30
Identities = 28/79 (35%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = -2
Query: 519 ASXLFXGWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXG 340
+S LF GGG G GG CG GGG G CGGG GC G
Sbjct: 18 SSFLFPSAGGGGGGGGCGGGCG-----GGCGGGGGCAPPPAPCGGGCGGGGG--GCGGGG 70
Query: 339 XXVXFR---GXGXGXGGXG 292
G G G GG G
Sbjct: 71 GCAPPPAPCGGGCGGGGGG 89
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/67 (34%), Positives = 23/67 (34%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C GGG GG C G G G GG G G C G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG----GGGGCGGGGGGCGGGGGGCG 125
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 126 GGGGGCG 132
Score = 32.3 bits (70), Expect = 0.70
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = -1
Query: 394 GXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXGXXVRGXXVCXCGRPPXXXGPRAXV 215
G C G GGG GG G G G GG G G G CG G
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG---GCG---GGGGGGCGG 141
Query: 214 GDVGGCG 194
G GGCG
Sbjct: 142 GSSGGCG 148
Score = 31.9 bits (69), Expect = 0.92
Identities = 26/70 (37%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXX---GGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
GGG G GGC G GGG G G CGGG GC G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGG------GGGGCGGGGG--GCGGGGGC---G 104
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 105 GGGGGCGGGG 114
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GG G + GGG G G C G G
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCG 91
Query: 321 GXGXGXGGXG 292
G G G GG G
Sbjct: 92 GGGGGCGGGG 101
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/71 (35%), Positives = 25/71 (35%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GG CG GG G G CGGG GC G G G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG--GCGGGGG-GGCGGGGGG----GCG 172
Query: 312 XGXGGXGXVXV 280
G G G V
Sbjct: 173 GGSSGGGGYAV 183
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXV-VGCXXXGXXVXF 325
G GGG G GG CG GG G G GGG G G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVA 184
Query: 324 RGXGXGXGGXG 292
G G GG G
Sbjct: 185 PSGGGGCGGGG 195
Score = 30.7 bits (66), Expect = 2.1
Identities = 25/68 (36%), Positives = 25/68 (36%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFR 322
G GGG G GGC G GGG G CGGG GC G
Sbjct: 118 GGGGGGCGGGGGGCGG------GGGGGCGGG-----SSGGCGGGSS-GGCGGGGGGGCGG 165
Query: 321 GXGXGXGG 298
G G G GG
Sbjct: 166 GGGGGCGG 173
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 36.7 bits (81), Expect = 0.032
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Frame = +1
Query: 406 EXPPXXTTXXPXXXRPPTTXTPPAXXT--PXKPTXKQXGRPNPTXLXKXALRQPQTNXNT 579
E PP TT P PPTT PP T P PT K P P+ T
Sbjct: 173 EAPPPPTTKAPP---PPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVT 229
Query: 580 XPXPXXPXAPKXQPKXQ*TNP 642
P P P K + T P
Sbjct: 230 APAPNPPAPENTTAKVETTKP 250
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.057
Identities = 25/72 (34%), Positives = 27/72 (37%)
Frame = -2
Query: 507 FXGWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVX 328
+ G+ GGG G GG G GGG G F G GGG G G
Sbjct: 129 YGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGG-G 187
Query: 327 FRGXGXGXGGXG 292
F G G G G G
Sbjct: 188 FGGGGMGGYGGG 199
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 373 GXXGGGXXXGGKXCXVQGXGVGXGGXGXG 287
G GGG GG G G+G GG G G
Sbjct: 150 GGYGGGGGGGGDFGGYGGGGMGGGGYGGG 178
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 35.5 bits (78), Expect = 0.075
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 195 PQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPP--XPTPXP*TXQXFPPXNXPPPX 368
P PP++P + P G + T P T P P PP P P P + Q PPP
Sbjct: 435 PPPPSAPPTIKFPISTG-TSYSSTTPPTTPKPAPPPPSRIPNPSP-SPQPAEVSKSPPPP 492
Query: 369 XP 374
P
Sbjct: 493 PP 494
Score = 34.3 bits (75), Expect = 0.17
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXH-TXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPPPXXPR 377
PPT+P A P +P+ + P P PP P P T PP PPP +
Sbjct: 459 PPTTPKPA--PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQ 516
Query: 378 HTXXXPXXTXXTAP 419
P P
Sbjct: 517 EISGPPTVRLTAVP 530
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +2
Query: 281 TXTXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQ 460
T P PP P P N + P + PPP P P PPP
Sbjct: 461 TTPKPAPPPPSRIP-NPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEIS 519
Query: 461 XPP 469
PP
Sbjct: 520 GPP 522
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 35.1 bits (77), Expect = 0.099
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +1
Query: 451 PPTTXTPPAXXTPXKPTXKQXGRPNPTXLXKXAL--RQPQTNXNTXPXPXXPXAPKXQPK 624
PPTT T P TP PT NPT + P T T P P +P Q
Sbjct: 480 PPTTVTVPTTPTPV-PTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPTTTGSPTTQTT 538
Query: 625 XQ*TNPHXP 651
T P P
Sbjct: 539 APVTKPTVP 547
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 35.1 bits (77), Expect = 0.099
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 195 PQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPP--XPTPXP*TXQXFPPXNXPPPX 368
P PP++P + P G + T P T P P PP P P P + Q PPP
Sbjct: 442 PPPPSAPPTIKFPISTGP-SYSSTTPPTTPKPAPPPPSRIPNPSP-SPQPAEVSKSPPPP 499
Query: 369 XP 374
P
Sbjct: 500 PP 501
Score = 35.1 bits (77), Expect = 0.099
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXH-TXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPPPXXP 374
PPT+P A P +P+ + P P PP P P T PP PPP P
Sbjct: 466 PPTTPKPA--PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 281 TXTXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
T P PP P P N + P + PPP P P PPP
Sbjct: 468 TTPKPAPPPPSRIP-NPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 516
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +3
Query: 183 GXXXPQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPP 362
G P PP P R P P P + P P+P P PP PP
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
Query: 363 P 365
P
Sbjct: 194 P 194
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 195 PQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPP-XPTPXP*TXQXFPPXNXPPPXX 371
P PP P +R P PRT P PP P P + Q PP PP
Sbjct: 122 PPPPPPPRKSRA-GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP-RTPPSPE 179
Query: 372 PRHTXXXP 395
PR+ P
Sbjct: 180 PRNPPRTP 187
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPT-TNXXHRPXPPPXXXTHXDRPQXP 466
P PP P P +P P PP A P + P PP H PQ P
Sbjct: 718 PGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGFHPSHPQHP 776
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.1 bits (72), Expect = 0.40
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +2
Query: 260 THXXXXXTXTXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXX 439
T+ T P PP P P P P PPP A P PPP
Sbjct: 13 TYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPY 72
Query: 440 THXDRPQXPP 469
P P
Sbjct: 73 PQHAVPAPAP 82
Score = 32.3 bits (70), Expect = 0.70
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 299 PPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
PP P P P P PPPH P H P PPP
Sbjct: 113 PPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPP---PPHYPPPPP 153
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 261 HTXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPPPXXP 374
H P P P P P Q PP PPP P
Sbjct: 105 HAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYP 142
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP--XNXPPP 365
PP PT + P GG P PR P P PP P P T PP PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSP----PPPRAGSP-PPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 31.9 bits (69), Expect = 0.92
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 1/112 (0%)
Frame = +1
Query: 289 PPXXPXXXPPXPEXXXXSXPXTXHHXTPPATXRXXHXXPEXPPXXTTXXPXXXRPPTTXT 468
PP PP P P T PPA PP P PPT
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP---PPPPPRGSPPTGSL 312
Query: 469 PPAXXTPXKPTXKQXGRPNPTXLXKXA-LRQPQTNXNTXPXPXXPXAPKXQP 621
PP P P P + A R P T P P+ P
Sbjct: 313 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 364
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP---XNXPPPXX 371
PP + + + P G P PRT P P P P P PP + PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 372 PR 377
PR
Sbjct: 303 PR 304
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
P PP PL + P PPP P P PPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P PP P T P + PPP P P PPP PP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP--XNXPPP 365
PP PT + P GG P PR P P PP P P T PP PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSP----PPPRAGSP-PPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 31.9 bits (69), Expect = 0.92
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 1/112 (0%)
Frame = +1
Query: 289 PPXXPXXXPPXPEXXXXSXPXTXHHXTPPATXRXXHXXPEXPPXXTTXXPXXXRPPTTXT 468
PP PP P P T PPA PP P PPT
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP---PPPPPRGSPPTGSL 333
Query: 469 PPAXXTPXKPTXKQXGRPNPTXLXKXA-LRQPQTNXNTXPXPXXPXAPKXQP 621
PP P P P + A R P T P P+ P
Sbjct: 334 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 385
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP---XNXPPPXX 371
PP + + + P G P PRT P P P P P PP + PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 372 PR 377
PR
Sbjct: 324 PR 325
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
P PP PL + P PPP P P PPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P PP P T P + PPP P P PPP PP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP--XNXPPP 365
PP PT + P GG P PR P P PP P P T PP PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSP----PPPRAGSP-PPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 31.9 bits (69), Expect = 0.92
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 1/112 (0%)
Frame = +1
Query: 289 PPXXPXXXPPXPEXXXXSXPXTXHHXTPPATXRXXHXXPEXPPXXTTXXPXXXRPPTTXT 468
PP PP P P T PPA PP P PPT
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP---PPPPPRGSPPTGSL 318
Query: 469 PPAXXTPXKPTXKQXGRPNPTXLXKXA-LRQPQTNXNTXPXPXXPXAPKXQP 621
PP P P P + A R P T P P+ P
Sbjct: 319 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 370
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP---XNXPPPXX 371
PP + + + P G P PRT P P P P P PP + PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 372 PR 377
PR
Sbjct: 309 PR 310
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
P PP PL + P PPP P P PPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P PP P T P + PPP P P PPP PP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.53
Identities = 27/82 (32%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Frame = +3
Query: 138 TGXXPQXXTTXHXTXGXXXPQPPTS-PTXARGPXXX---GGLPHXHTXXPRTXXPXP--- 296
TG P T G P PP P GP GGLP + P P P
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-SGGPPPPPPPPGGC 768
Query: 297 XPPXPTPXP*TXQXFPPXNXPP 362
PP P P P + PP PP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 281 TXTXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
T P PP P P P P PPP P P PPP
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.53
Identities = 27/82 (32%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Frame = +3
Query: 138 TGXXPQXXTTXHXTXGXXXPQPPTS-PTXARGPXXX---GGLPHXHTXXPRTXXPXP--- 296
TG P T G P PP P GP GGLP + P P P
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-SGGPPPPPPPPGGC 768
Query: 297 XPPXPTPXP*TXQXFPPXNXPP 362
PP P P P + PP PP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 281 TXTXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
T P PP P P P P PPP P P PPP
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.53
Identities = 27/82 (32%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Frame = +3
Query: 138 TGXXPQXXTTXHXTXGXXXPQPPTS-PTXARGPXXX---GGLPHXHTXXPRTXXPXP--- 296
TG P T G P PP P GP GGLP + P P P
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI-SGGPPPPPPPPGGC 351
Query: 297 XPPXPTPXP*TXQXFPPXNXPP 362
PP P P P + PP PP
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 281 TXTXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPP 430
T P PP P P P P PPP P P PPP
Sbjct: 322 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.70
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPPPXXP 374
PP P GP GG+P R P PP P +PP PPP P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP---PPPSRP 371
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 299 PPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXT 442
PP P P P + T P PT P P++ P PPP T
Sbjct: 261 PPVPPPPP-SVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT 307
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 302 PXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P P P P T P PPP P P PPP P PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 341 PXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P P + P P PT RP PPP P PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.70
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +3
Query: 201 PPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPPPXXP 374
PP P GP GG+P R P PP P +PP PPP P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP---PPPSRP 381
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 299 PPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXT 442
PP P P P + T P PT P P++ P PPP T
Sbjct: 271 PPVPPPPP-SVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT 317
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 302 PXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P P P P T P PPP P P PPP P PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 341 PXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P P + P P PT RP PPP P PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 31.9 bits (69), Expect = 0.92
Identities = 24/110 (21%), Positives = 29/110 (26%), Gaps = 7/110 (6%)
Frame = +1
Query: 313 PPXPEXXXXSXPXTXHHXTPPATXRXXHXXPEXPPXXTTXXPXXXRPPTTXTPPAXXTPX 492
PP P P PP P+ P P + A P
Sbjct: 341 PPKPAVQQAQAPVVQQAPAPPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPP 400
Query: 493 KPTXKQXG-------RPNPTXLXKXALRQPQTNXNTXPXPXXPXAPKXQP 621
KP +Q +P P+ QP T P P AP P
Sbjct: 401 KPAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAP 450
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 31.9 bits (69), Expect = 0.92
Identities = 26/95 (27%), Positives = 29/95 (30%), Gaps = 3/95 (3%)
Frame = +3
Query: 99 PEPXK-VXNDXGXKTGXXPQXXTTXHXTXGXXXPQPPTSPTXARGPXXXGGLPHXHTXXP 275
P+P V N TG P T P P +P R P +
Sbjct: 59 PKPTNPVQNPNKLSTGLPPMTMMLP-PTVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQ 117
Query: 276 RTXXPXPXPPXPTPXP*TXQ--XFPPXNXPPPXXP 374
RT P PP P P T P PPP P
Sbjct: 118 RTPPQCPPPPVPHPPQITQMAPILPTSPAPPPPIP 152
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 287 TXPXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXP 394
T P PP P P P P T P PH P
Sbjct: 143 TSPAPPPPIPHPPQRAQMNCLPLPQTFQPLPHPPVP 178
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.92
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXPTTXXPPPHXAXPTTNXXHRPXPPPXXXTHXDRPQXPP 469
P PP P P P + P P PP PT P PPP P PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPP--PPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 276 RTXXPXPXPPXPTPXP*TXQXFPPXNXPPP 365
R+ P P PP P P P + P PPP
Sbjct: 1332 RSSSPSPPPPPPPPPPPSDDLTPVPPPPPP 1361
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 195 PQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPPXNXPPPXXP 374
P PP P+ P P T P P PP P P PP PPP P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPP-PPPLFSPSMILPP---PPPPLP 1397
Query: 375 RHTXXXPXXT 404
P T
Sbjct: 1398 SEEKKNPLPT 1407
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -2
Query: 501 GWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGG 370
G GGG G GGC G GGG G G CGGG
Sbjct: 89 GCGGGGCGGGGGGCGGGGGCGGGGGGGCGGG-----GGGGCGGG 127
Score = 29.9 bits (64), Expect = 3.7
Identities = 25/67 (37%), Positives = 25/67 (37%)
Frame = -2
Query: 492 GGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXGXXVXFRGXG 313
GGG G GG CG GGG G G CGGG GC G G G
Sbjct: 86 GGGGCG--GGGCGGGGGGCGGGGGCGGG-----GGGGCGGGGG-GGCGGGGGG---GGGG 134
Query: 312 XGXGGXG 292
GG G
Sbjct: 135 YASGGSG 141
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXP--TTXXPPPHXAXPTTNXXHRPXPPP 430
P PP P P T P T+ PPP P + P PPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 293 PXPPXPXPXPLNXTXFPXXXXP--TTXXPPPHXAXPTTNXXHRPXPPP 430
P PP P P T P T+ PPP P + P PPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 299 PPXPXPXPLNXTXFPXXXX-PTTXXPPPHXAXPTTNXXHRPXPPP 430
PP P P P + P P PPP P P PPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 29.1 bits (62), Expect = 6.5
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +3
Query: 195 PQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPPXN--XPPPX 368
P PP + RG LP P PP P P P P + PPP
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 633
Query: 369 XP 374
P
Sbjct: 634 PP 635
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 299 PPXPXPXPLNXTXFPXXXX-PTTXXPPPHXAXPTTNXXHRPXPPP 430
PP P P P + P P PPP P P PPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 29.1 bits (62), Expect = 6.5
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +3
Query: 195 PQPPTSPTXARGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPPXN--XPPPX 368
P PP + RG LP P PP P P P P + PPP
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 459
Query: 369 XP 374
P
Sbjct: 460 PP 461
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/73 (32%), Positives = 27/73 (36%)
Frame = -2
Query: 519 ASXLFXGWFGGGXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVGXAXCGGGXXVVGCXXXG 340
AS F G GGG G GG G + GGG G + G GGG G
Sbjct: 47 ASNFFGGGGGGGGGGGGGGFGGGN---GGFGGGGGGNYGGGGGNQG-GGGGGGFNFNDIG 102
Query: 339 XXVXFRGXGXGXG 301
+ G G G G
Sbjct: 103 GLINSMGGGGGGG 115
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.8
Identities = 26/78 (33%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Frame = -2
Query: 519 ASXLFXGWFGGGXXGXXGGCCGRSXXV-----XXXGGGXGRXFXXVVGXAXCGGGXXVVG 355
AS F G GGG G GG G + GGG G +VG GGG G
Sbjct: 47 ASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGG----G 102
Query: 354 CXXXGXXVXFRGXGXGXG 301
G +G G G G
Sbjct: 103 GGNYGGGGGNQGGGGGGG 120
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.8
Identities = 27/93 (29%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Frame = -2
Query: 564 LGLSECXFXEXCWVXASXLFXGWFGG--GXXGXXGGCCGRSXXVXXXGGGXGRXFXXVVG 391
LGL+ C + W + GW G G G GG GGG G G
Sbjct: 13 LGLATCQWGPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDW---G 69
Query: 390 XAXCGGGXXVVGCXXXGXXVXFRGXGXGXGGXG 292
GGG G G G G GG G
Sbjct: 70 GNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRG 102
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +3
Query: 183 GXXXPQPPTSPTXARGPXXXGGLPHXHTXXPRTXXP--XPXPPXPTPXP*TXQXF-PPXN 353
G P P P +GP GLP ++ P P PP P P F PP +
Sbjct: 212 GIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGD 271
Query: 354 XPPP 365
P
Sbjct: 272 SGEP 275
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +3
Query: 183 GXXXPQPPTSPTXARGPXXXGGLPHXHTXXPRTXXP--XPXPPXPTPXP*TXQXF-PPXN 353
G P P P +GP GLP ++ P P PP P P F PP +
Sbjct: 212 GIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGD 271
Query: 354 XPPP 365
P
Sbjct: 272 SGEP 275
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +3
Query: 177 TXGXXXPQPPTSPTXA---RGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP 347
T P PP +P A + P H + P P PP P P + PP
Sbjct: 116 TASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPP 175
Query: 348 XNXPPP 365
PPP
Sbjct: 176 ---PPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +3
Query: 177 TXGXXXPQPPTSPTXA---RGPXXXGGLPHXHTXXPRTXXPXPXPPXPTPXP*TXQXFPP 347
T P PP +P A + P H + P P PP P P + PP
Sbjct: 116 TASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPP 175
Query: 348 XNXPPP 365
PPP
Sbjct: 176 ---PPP 178
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/76 (25%), Positives = 26/76 (34%)
Frame = +1
Query: 403 PEXPPXXTTXXPXXXRPPTTXTPPAXXTPXKPTXKQXGRPNPTXLXKXALRQPQTNXNTX 582
P+ P +P P P KP K +P P K + P+ N
Sbjct: 179 PKPDPKPKPKPKPKPKPKPNPKPEPKPKP-KPEPKPKPKPEPKPKPKPKPK-PKPKPNPN 236
Query: 583 PXPXXPXAPKXQPKXQ 630
P P PK +PK +
Sbjct: 237 PKPEPKPKPKPKPKPE 252
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -1
Query: 427 WWXGAVXXVXXGXCXVWRGXXGGGXXXGGKXCXVQGXGVGXGGXGXG 287
W G + G RG G G GG+ QG G G GG G G
Sbjct: 556 WLEGMSGDMRSGGGYRGRGGRGNGQRFGGRDHRYQG-GSGNGGGGNG 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.307 0.128 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,380,665
Number of Sequences: 27780
Number of extensions: 257724
Number of successful extensions: 1607
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
- SilkBase 1999-2023 -