Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H21
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       31   1.2  
05_01_0120 - 828834-831143                                             29   3.8  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +3

Query: 606 SGAGGGGGXGXXXXKXXPPPXXGXXG 683
           SG GGGGG G       PPP  G  G
Sbjct: 77  SGGGGGGGGGTVMYTSPPPPYSGGGG 102


>05_01_0120 - 828834-831143
          Length = 769

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 606 SGAGGGGGXGXXXXKXXPPP 665
           +GAGGGGG G    +  PPP
Sbjct: 39  AGAGGGGGAGAGQARRIPPP 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,693,123
Number of Sequences: 37544
Number of extensions: 216700
Number of successful extensions: 2957
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2772
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)