Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_H19
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein. 33 1.5
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein. 33 1.5
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 32 2.5
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 4.5
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 4.5
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 4.5
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 5.9
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 5.9
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 5.9
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 5.9
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 5.9
>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
Length = 1192
Score = 33.1 bits (72), Expect = 1.5
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Frame = +1
Query: 667 PPXXTXXKFXPPXXRXAN-PXXXFXXSXXFP------PXKXPPXXXPFXHPXRXPXXPXP 825
PP F PP A P FP P PP P P P P
Sbjct: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
Query: 826 XFXPLGXGGXXFX*PPPCXXFPXP 897
P G G F PPP P P
Sbjct: 133 PGAPPGQGTFPFMMPPPSMPHPPP 156
>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
Length = 1374
Score = 33.1 bits (72), Expect = 1.5
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Frame = +1
Query: 667 PPXXTXXKFXPPXXRXAN-PXXXFXXSXXFP------PXKXPPXXXPFXHPXRXPXXPXP 825
PP F PP A P FP P PP P P P P
Sbjct: 73 PPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPV 132
Query: 826 XFXPLGXGGXXFX*PPPCXXFPXP 897
P G G F PPP P P
Sbjct: 133 PGAPPGQGTFPFMMPPPSMPHPPP 156
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = +1
Query: 754 PPXKXPPXXXPFXHPXRXPXXPXPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
PP PP P+ HP P P P P+ F PPP P PG PP
Sbjct: 292 PPAYGPPAHLPY-HPHVYPPNPPP--PPVPPPPASF--PPPAIPPPTPGYPPPPP 341
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 4.5
Identities = 28/94 (29%), Positives = 29/94 (30%), Gaps = 4/94 (4%)
Frame = +1
Query: 649 FXQXAPPPXXTXXKFXPPXXRXANPXXXFXXSXXFPPXKXPPXXXPFXHPXRXPXXP--- 819
F APPP + PP R P F PP PP P P P P
Sbjct: 29 FRGPAPPPNAVM-RGPPPLMR---PPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGG 84
Query: 820 -XPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
P P F PPP P P PP
Sbjct: 85 IPPPMGPPHLQRPPFM-PPPMSSMPPPPGMMFPP 117
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 31.5 bits (68), Expect = 4.5
Identities = 28/94 (29%), Positives = 29/94 (30%), Gaps = 4/94 (4%)
Frame = +1
Query: 649 FXQXAPPPXXTXXKFXPPXXRXANPXXXFXXSXXFPPXKXPPXXXPFXHPXRXPXXP--- 819
F APPP + PP R P F PP PP P P P P
Sbjct: 29 FRGPAPPPNAVM-RGPPPLMR---PPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGG 84
Query: 820 -XPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
P P F PPP P P PP
Sbjct: 85 IPPPMGPPHLQRPPFM-PPPMSSMPPPPGMMFPP 117
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 31.5 bits (68), Expect = 4.5
Identities = 28/94 (29%), Positives = 29/94 (30%), Gaps = 4/94 (4%)
Frame = +1
Query: 649 FXQXAPPPXXTXXKFXPPXXRXANPXXXFXXSXXFPPXKXPPXXXPFXHPXRXPXXP--- 819
F APPP + PP R P F PP PP P P P P
Sbjct: 33 FRGPAPPPNAVM-RGPPPLMR---PPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGG 88
Query: 820 -XPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
P P F PPP P P PP
Sbjct: 89 IPPPMGPPHLQRPPFM-PPPMSSMPPPPGMMFPP 121
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 754 PPXKXPPXXXPFXHPXRXPXXPXPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
PP + PP P P R P PLG P P P PG PP
Sbjct: 487 PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP---LPNPGVLSAPP 538
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 754 PPXKXPPXXXPFXHPXRXPXXPXPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
PP + PP P P R P PLG P P P PG PP
Sbjct: 246 PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP---LPNPGVLSAPP 297
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 754 PPXKXPPXXXPFXHPXRXPXXPXPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
PP + PP P P R P PLG P P P PG PP
Sbjct: 487 PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP---LPNPGVLSAPP 538
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 754 PPXKXPPXXXPFXHPXRXPXXPXPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
PP + PP P P R P PLG P P P PG PP
Sbjct: 487 PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP---LPNPGVLSAPP 538
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 754 PPXKXPPXXXPFXHPXRXPXXPXPXFXPLGXGGXXFX*PPPCXXFPXPGXXXXPP 918
PP + PP P P R P PLG P P P PG PP
Sbjct: 487 PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP---LPNPGVLSAPP 538
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,059,714
Number of Sequences: 237096
Number of extensions: 1648544
Number of successful extensions: 3348
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3163
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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