Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_H16
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging ... 235 4e-62
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 35 0.067
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 34 0.15
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 32 0.62
AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine re... 29 4.4
Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical pr... 29 5.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 5.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 29 5.8
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 29 5.8
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 28 7.7
>U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging
adult overexpressionprotein 3 protein.
Length = 303
Score = 235 bits (574), Expect = 4e-62
Identities = 123/234 (52%), Positives = 156/234 (66%), Gaps = 4/234 (1%)
Frame = +1
Query: 190 FEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRDITEIELLAKITSLNESPS 369
F LAIVQVG R DSNVYI KLK A++IG + I+LP IT+ +L +I +LN
Sbjct: 33 FHAVLAIVQVGNRSDSNVYINSKLKKAKEIGADGKLIKLPDTITQGDLKREIMALNHDNE 92
Query: 370 VHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTINEGRVAVGDLSGFI-PCTPAGCV 546
+ GII+Q+PLD H IDA V D + P KDVDGL IN GR+A G+L I PCTP GC+
Sbjct: 93 IDGIIIQLPLDCKHEIDADSVIDLIDPLKDVDGLTRINAGRLARGELQRTIFPCTPFGCL 152
Query: 547 ELIKK-TGVT--IAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNLSEITKTAE 717
L+++ TG ++GK VVVLGRS+IVG+P + L W H TVT+CHSKT NL E A+
Sbjct: 153 YLVQQATGDANFVSGKEVVVLGRSKIVGSPAAALFLWHHGTVTICHSKTPNLKEKCLRAD 212
Query: 718 ILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKKSGQRXVGDVAYQXAXKV 879
IL+VAIGR V+ WIKPGA VIDCGIN +DP + ++ GDV + A +V
Sbjct: 213 ILIVAIGRKHFVKADWIKPGAFVIDCGINVGDDP---NSRKIYGDVDTEAAKEV 263
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 35.1 bits (77), Expect = 0.067
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Frame = -3
Query: 854 TSPTXRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATTSISAVLVISLKFLVFE 675
T+ T + V +++ IP ++ T+P I P T+ P ++ + V +V
Sbjct: 281 TTVTGPTTVVTVPTTVVTIPSTVVTSP--ITTPSTVVTVPSTVVTVPSTAVTKPSTVVTA 338
Query: 674 WHTV-TVACSHFSNSDTGV---PTMRLRPSTTTFLPAIVTPVFLMSSTHPAGVQGINPDR 507
TV TV + + +T V PT+ P+T P+ V V T P V
Sbjct: 339 PSTVVTVPSTVVTKPNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTV------- 391
Query: 506 SPTATRPSLIVFKPSTSLSGETASVTR*ASIAWSESRG 393
T PS +V PST ++ T +T +++ + + G
Sbjct: 392 ---VTNPSTVVTAPSTVVTVPTTVMTSRSTVITTPTTG 426
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 788 ITTAPGLIQEPRTISGRPIATTSISA--VLVISLKFLVFEWHTVTVACSHFSNSDTGVPT 615
+TT+ S P T +IS V+++ T TV + + TG T
Sbjct: 231 VTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVP--TTTVTGPTT 288
Query: 614 MRLRPSTTTFLPA-IVTPVFLMSSTHPAGVQGINPDRSPTATRPSLIVFKPSTSLSGETA 438
+ P+T +P+ +VT ST + S T+PS +V PST ++ +
Sbjct: 289 VVTVPTTVVTIPSTVVTSPITTPSTVVTVPSTVVTVPSTAVTKPSTVVTAPSTVVTVPST 348
Query: 437 SVTR 426
VT+
Sbjct: 349 VVTK 352
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 1/124 (0%)
Frame = -3
Query: 797 PQSITTAPGLIQEPRTISGRPIATTSISAVLVISLKFLVFEWHTVTVACSHFSNSDTGVP 618
P + TT P T + TT+ + ++ T T + + T P
Sbjct: 182 PTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP 241
Query: 617 TMRLRPSTTTFLPAIVTPVFLMSSTHPAGVQGINPDRSP-TATRPSLIVFKPSTSLSGET 441
T P+TTT TP +T P +P T T P+ T+ S T
Sbjct: 242 TTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTT 301
Query: 440 ASVT 429
+ T
Sbjct: 302 TTKT 305
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.62
Identities = 35/116 (30%), Positives = 47/116 (40%)
Frame = -3
Query: 815 SSIALIPQSITTAPGLIQEPRTISGRPIATTSISAVLVISLKFLVFEWHTVTVACSHFSN 636
SS + S TT +G P+ T A + S+ L T VA S SN
Sbjct: 698 SSSGTVSNSTTTTTTATTTSSKSTGNPLFTCEHCARQLCSMSNLKRHRATCKVAASSSSN 757
Query: 635 SDTGVPTMRLRPSTTTFLPAIVTPVFLMSSTHPAGVQGINPDRSPTATRPSLIVFK 468
S P +PST PA TP+ L +S P +Q P +SP T ++ K
Sbjct: 758 SAASRPPS--QPSTPATAPA--TPM-LQASQAPQPLQA--PPQSPMETTATVTYTK 806
>AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 67 protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 810 NSVDTTVYNDGSRLDPRAS-DHLWTTDRHHQYFCCLSNFTQILSL*MAHC 664
N +DT + D +R A H W + R FCC+ T +LSL + C
Sbjct: 149 NVIDTPIDCDSARCCYNACYAHFWIS-REQVMFCCIVMMTVLLSLKLVVC 197
>Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical
protein C17G1.1 protein.
Length = 280
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 638 C*NGNTLLSQCAIQRLRI*VKLLRQQKYWWWRSVVQRWSEAL-GSSLEPSL*TVVSTLL 811
C G+ ++ +CA + I K + ++ W+W SV+ SEAL SS + SL LL
Sbjct: 76 CWTGDVVIKECASACVSIYTKS-KTREGWFWTSVLMDCSEALIWSSPDLSLKPTTMVLL 133
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = -3
Query: 782 TAPGLIQEPRTISGRPIATTSISAVLV--ISLKFLVFEWHTVTVACSHFSNSDTGVPTMR 609
TAP + P T P ++T+ V S T + +++ T T
Sbjct: 641 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 700
Query: 608 LRPSTTTFLPAIVTPVFLMSS----THPAGVQGINPDRSPTATRPSLIVFKPSTSLS 450
TT P + TP + + T PA P +PT T P+ F + S++
Sbjct: 701 TTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTTTQFSSAVSVA 757
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein
C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = -3
Query: 782 TAPGLIQEPRTISGRPIATTSISAVLV--ISLKFLVFEWHTVTVACSHFSNSDTGVPTMR 609
TAP + P T P ++T+ V S T + +++ T T
Sbjct: 697 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 756
Query: 608 LRPSTTTFLPAIVTPVFLMSS----THPAGVQGINPDRSPTATRPSLIVFKPSTSLS 450
TT P + TP + + T PA P +PT T P+ F + S++
Sbjct: 757 TTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTTTQFSSAVSVA 813
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Frame = -3
Query: 782 TAPGLIQEPRTISGRPIATTSISAVLV--ISLKFLVFEWHTVTVACSHFSNSDTGVPTMR 609
TAP + P T P ++T+ V S T + +++ T T
Sbjct: 520 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
Query: 608 LRPSTTTFLPAIVTPVFLMSS----THPAGVQGINPDRSPTATRPSLIVFKPSTSLS 450
TT P + TP + + T PA P +PT T P+ F + S++
Sbjct: 580 TTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTTTQFSSAVSVA 636
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 677 EWHTVTVACSHFSNSDTGVPTMRLRPSTTTFL 582
+WH H SN+ VP + PST+T+L
Sbjct: 698 DWHVKQNLARHGSNNSAAVPYRQWYPSTSTWL 729
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 307 PRDITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNT 477
PRD+TE+E I+ L E ++ G+ V++ D D +D D D++ D NT
Sbjct: 581 PRDLTELEEELGISILEE--TLDGMNVELLDDDDWIVDDDNDEDGECIDEEEDYDNT 635
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 501 YCYSTFVNCV*AVNIFIRRDSISDSMSVDRVV-RIKGHL-NNDAVNRRRFIQTRYF 340
Y +T+ + +V IF+ ++ S V+ R K HL +ND RRR ++ R+F
Sbjct: 169 YIITTYTDYYTSVAIFVVMSTLDFSTFTMLVLYRRKSHLTSNDETRRRRRVEIRFF 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,216,185
Number of Sequences: 27780
Number of extensions: 400587
Number of successful extensions: 1181
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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