Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H14
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0144 - 31969609-31969866,31969961-31970371,31970472-319705...    28   8.6  
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152...    28   8.6  

>03_06_0144 -
           31969609-31969866,31969961-31970371,31970472-31970542,
           31970637-31970723,31970816-31971389
          Length = 466

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 843 GGGRXINAXKPPXPPP 796
           GGGR  +  KPP PPP
Sbjct: 56  GGGRDTSGPKPPPPPP 71


>02_05_0962 +
           33114226-33114684,33114806-33114853,33115166-33115286,
           33115760-33116008,33116149-33116302,33116493-33116985,
           33117524-33117596,33118285-33118343
          Length = 551

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +2

Query: 791 GXGGGXGGFXALMXRPPP 844
           G GGG GGF  L   PPP
Sbjct: 53  GGGGGGGGFLRLRSAPPP 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,803,075
Number of Sequences: 37544
Number of extensions: 310985
Number of successful extensions: 1079
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)