Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H10
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    31   1.1  
U41007-7|AAA82268.3|  516|Caenorhabditis elegans Intramembrane p...    29   5.8  

>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 156 ELRLRVWCWLSARSALLLEPRWKLFKKIEKVG 251
           E+  R+W WL+ ++  L+E + +  KK++K G
Sbjct: 769 EMLERIWTWLTLKTKALVEQQDEQMKKVQKAG 800


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 156 ELRLRVWCWLSARSALLLEPRWKLFKKIEKVG 251
           E+  R+W WL+ ++  L+E + +  KK++K G
Sbjct: 769 EMLERIWTWLTLKTKALVEQQDEQMKKVQKAG 800


>U41007-7|AAA82268.3|  516|Caenorhabditis elegans Intramembrane
           protease (impas)family protein 3 protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 268 PSRTLRPTFSIFLKSFHLGSRSSADRAESQHQTRRRSSKIRTESSF 131
           P+  L   FSI L   +LG++ SA+    +   R    +++T SSF
Sbjct: 49  PAMILPFVFSIVLYFVYLGTKRSANIERDREIAREAEKELKTSSSF 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,712,847
Number of Sequences: 27780
Number of extensions: 222157
Number of successful extensions: 368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)