Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H09
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical pr...   123   2e-28
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    40   0.002
Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ...    30   2.0  

>Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical
           protein C52E4.3 protein.
          Length = 118

 Score =  123 bits (297), Expect = 2e-28
 Identities = 62/98 (63%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = +1

Query: 355 MTSTTKPRSXXXXXXXXXXXXXXFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGXVKAFD 534
           M++  KPRS              F+ GPLS+LT SVKNN QVLINCRNNKKLLG VKAFD
Sbjct: 1   MSAQAKPRSEMTAEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFD 60

Query: 535 RHCNMVLENVKEMWTEVPXT-XXXXXXXAVNKDKFISK 645
           RHCNMVLENVKEMWTEVP T        +V KD+FISK
Sbjct: 61  RHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISK 98


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +1

Query: 436 PLSVLTQSVKNNTQVLINCRNNKKLLGXVKAFDRHCNMVLENVKEMWT 579
           PL +L  S+  + +V +  RN+++L G ++AFD+H NMVL  V+E  T
Sbjct: 17  PLDLLRLSL--DERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETIT 62


>Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical
           protein F28F8.3 protein.
          Length = 91

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 15/45 (33%), Positives = 30/45 (66%)
 Frame = +1

Query: 436 PLSVLTQSVKNNTQVLINCRNNKKLLGXVKAFDRHCNMVLENVKE 570
           PL ++ + + +   V++  +N+K+++G +  FD + NMVLE+V E
Sbjct: 14  PLELIDKCIGSKIWVIM--KNDKEIVGTLTGFDDYVNMVLEDVVE 56


>Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical
           protein F40F8.9 protein.
          Length = 125

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 15/46 (32%), Positives = 30/46 (65%)
 Frame = +1

Query: 433 GPLSVLTQSVKNNTQVLINCRNNKKLLGXVKAFDRHCNMVLENVKE 570
           G +S+  Q  K   ++L+  R+ +KL+G +++ D+  N++LE+V E
Sbjct: 10  GAISLFEQLDK---KLLVVLRDGRKLIGFLRSIDQFANLILEDVVE 52


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 279 HXKSTLYFVYGQEQFFDLHHHRIRDL 202
           H +S L   + Q Q F++H+H+IR+L
Sbjct: 586 HLQSELQTAHAQRQEFEIHYHQIREL 611


>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
           protein R148.3b protein.
          Length = 1130

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 279 HXKSTLYFVYGQEQFFDLHHHRIRDL 202
           H +S L   + Q Q F++H+H+IR+L
Sbjct: 598 HLQSELQTAHAQRQEFEIHYHQIREL 623


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,946,565
Number of Sequences: 27780
Number of extensions: 279001
Number of successful extensions: 604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)