Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H07
         (896 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49254-1|CAA89220.1|  153|Homo sapiens L23-related gene protein.       52   2e-06
U26596-1|AAC50415.1|  153|Homo sapiens ribosomal protein L23-rel...    52   2e-06
BC027710-1|AAH27710.1|  153|Homo sapiens mitochondrial ribosomal...    52   2e-06

>Z49254-1|CAA89220.1|  153|Homo sapiens L23-related gene protein.
          Length = 153

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
 Frame = +2

Query: 56  KNLLXVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSIN 232
           + +  VPV  VRT++  G  K+   +   IK+ D KVA+V L    TF +PDLF EK  +
Sbjct: 58  EGIYNVPVAAVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDES 117

Query: 233 EEEEHAKSLDESKKNFRKY-IDHNKSRPDIPSWFSI 337
            E   A  L    +  R+     +  R  +PSWF +
Sbjct: 118 PEGSAADDLYSMLEEERQQRQSSDPRRGGVPSWFGL 153


>U26596-1|AAC50415.1|  153|Homo sapiens ribosomal protein
           L23-related product protein.
          Length = 153

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
 Frame = +2

Query: 56  KNLLXVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSIN 232
           + +  VPV  VRT++  G  K+   +   IK+ D KVA+V L    TF +PDLF EK  +
Sbjct: 58  EGIYNVPVAAVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDES 117

Query: 233 EEEEHAKSLDESKKNFRKY-IDHNKSRPDIPSWFSI 337
            E   A  L    +  R+     +  R  +PSWF +
Sbjct: 118 PEGSAADDLYSMLEEERQQRQSSDPRRGGVPSWFGL 153


>BC027710-1|AAH27710.1|  153|Homo sapiens mitochondrial ribosomal
           protein L23 protein.
          Length = 153

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
 Frame = +2

Query: 56  KNLLXVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSIN 232
           + +  VPV  VRT++  G  K+   +   IK+ D KVA+V L    TF +PDLF EK  +
Sbjct: 58  EGIYNVPVAAVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDES 117

Query: 233 EEEEHAKSLDESKKNFRKY-IDHNKSRPDIPSWFSI 337
            E   A  L    +  R+     +  R  +PSWF +
Sbjct: 118 PEGSAADDLYSMLEEERQQRQSSDPRRGGVPSWFGL 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,116,035
Number of Sequences: 237096
Number of extensions: 1154530
Number of successful extensions: 1696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)