Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_H06
(1237 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 29 0.59
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. 27 0.95
AK128867-1|BAC87651.1| 121|Homo sapiens protein ( Homo sapiens ... 27 1.2
AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5 (od... 26 2.2
AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5 pr... 26 2.2
AK024492-1|BAB15782.1| 208|Homo sapiens FLJ00096 protein protein. 26 2.4
BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein. 26 3.1
AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein. 26 3.1
AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein. 26 3.1
AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein pr... 26 3.1
AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens ... 26 3.7
AL109810-2|CAI19160.1| 746|Homo sapiens tripartite motif-contai... 26 3.7
BX284695-2|CAI17373.1| 1461|Homo sapiens KIAA0460 protein. 29 5.9
AL611942-3|CAH70314.1| 1461|Homo sapiens KIAA0460 protein. 29 5.9
AL356356-10|CAI15497.1| 1461|Homo sapiens KIAA0460 protein. 29 5.9
AB007929-1|BAA32305.2| 1452|Homo sapiens KIAA0460 protein protein. 29 5.9
BX284695-1|CAI17374.1| 1435|Homo sapiens KIAA0460 protein. 29 5.9
AL611942-2|CAH70313.1| 1435|Homo sapiens KIAA0460 protein. 29 5.9
AL356356-11|CAI15496.1| 1435|Homo sapiens KIAA0460 protein. 29 5.9
BC045623-1|AAH45623.2| 1398|Homo sapiens KIAA0460 protein protein. 29 5.9
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 25 6.8
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 25 7.8
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 25 7.8
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 25 7.8
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 25 7.8
L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiester... 26 8.0
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 25 8.1
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 8.6
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 8.6
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 28.7 bits (61), Expect(2) = 1.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 119 LXGXXGGPXXXXPPXXGXXHXXCXXXPPPPPP 24
L G GG PP G PPPPPP
Sbjct: 21 LPGPKGGFEPGPPPAPGPGAGLLAPGPPPPPP 52
Score = 28.3 bits (60), Expect(2) = 0.59
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -1
Query: 103 GGXXXAPPXXXGSXTXHVXXXPPPPPP 23
GG PP G + PPPPPP
Sbjct: 26 GGFEPGPPPAPGPGAGLLAPGPPPPPP 52
Score = 25.4 bits (53), Expect(2) = 0.59
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPPS
Sbjct: 84 PPPPPPPS 91
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 41 PPPPPPP 21
PPPPPPP
Sbjct: 69 PPPPPPP 75
>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
Length = 1315
Score = 27.1 bits (57), Expect(2) = 0.95
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 54 MXGXXPPPPPPP 19
M G PPPPPPP
Sbjct: 549 MQGGPPPPPPPP 560
Score = 25.8 bits (54), Expect(2) = 0.95
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 557 PPPPPPPPG 565
>AK128867-1|BAC87651.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46838 fis, clone UTERU2035926. ).
Length = 121
Score = 27.5 bits (58), Expect(2) = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 104 GGPXXXXPPXXGXXHXXCXXXPPPPPPP 21
GG PP H PPPPPPP
Sbjct: 68 GGVTAPRPPLPAL-HSAAPGLPPPPPPP 94
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 41 PPPPPPPL 18
PPPPPPPL
Sbjct: 93 PPPPPPPL 100
>AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5
(odd-paired homolog, Drosophila) protein.
Length = 663
Score = 25.8 bits (54), Expect(2) = 2.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 54 MXGXXPPPPPPP 19
+ G PPPPPPP
Sbjct: 406 LAGLPPPPPPPP 417
Score = 25.8 bits (54), Expect(2) = 2.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 418 PPPPPPPAG 426
>AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5
protein protein.
Length = 639
Score = 25.8 bits (54), Expect(2) = 2.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 54 MXGXXPPPPPPP 19
+ G PPPPPPP
Sbjct: 382 LAGLPPPPPPPP 393
Score = 25.8 bits (54), Expect(2) = 2.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 394 PPPPPPPAG 402
>AK024492-1|BAB15782.1| 208|Homo sapiens FLJ00096 protein protein.
Length = 208
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Frame = -3
Query: 137 CWXGXXLX-GXXGGPXXXXPPXXGXXHXXCXXXPPPPPPP 21
C G L G GP P PPPPPPP
Sbjct: 83 CTKGLVLPAGDEPGPGPELFPESALVQAGSAPPPPPPPPP 122
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 41 PPPPPPPL 18
PPPPPPPL
Sbjct: 118 PPPPPPPL 125
>BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 80 PPPPPPPPG 88
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 72 GPPPPPPPPP 81
>AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein.
Length = 251
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 80 PPPPPPPPG 88
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 72 GPPPPPPPPP 81
>AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 80 PPPPPPPPG 88
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 72 GPPPPPPPPP 81
>AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein
protein.
Length = 246
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 39 PPPPPPPXG 13
PPPPPPP G
Sbjct: 75 PPPPPPPPG 83
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 67 GPPPPPPPPP 76
>AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens
cDNA FLJ44831 fis, clone BRACE3047482, moderately
similar to Homo sapiens tripartite motif-containing 9
(TRIM9). ).
Length = 756
Score = 25.8 bits (54), Expect(2) = 3.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 70 GSXTXHVXXXPPPPPPP 20
G H PPPPPPP
Sbjct: 243 GPFAKHRLVQPPPPPPP 259
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP+ G
Sbjct: 254 PPPPPPPAEAASG 266
>AL109810-2|CAI19160.1| 746|Homo sapiens tripartite
motif-containing 67 protein.
Length = 746
Score = 25.8 bits (54), Expect(2) = 3.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 70 GSXTXHVXXXPPPPPPP 20
G H PPPPPPP
Sbjct: 243 GPFAKHRLVQPPPPPPP 259
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP+ G
Sbjct: 254 PPPPPPPAEAASG 266
>BX284695-2|CAI17373.1| 1461|Homo sapiens KIAA0460 protein.
Length = 1461
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1254 APPPPPGEHSGIPFPTPPPPPPP 1276
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1292 PPPPPPPVDHSG 1303
>AL611942-3|CAH70314.1| 1461|Homo sapiens KIAA0460 protein.
Length = 1461
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1254 APPPPPGEHSGIPFPTPPPPPPP 1276
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1292 PPPPPPPVDHSG 1303
>AL356356-10|CAI15497.1| 1461|Homo sapiens KIAA0460 protein.
Length = 1461
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1254 APPPPPGEHSGIPFPTPPPPPPP 1276
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1292 PPPPPPPVDHSG 1303
>AB007929-1|BAA32305.2| 1452|Homo sapiens KIAA0460 protein protein.
Length = 1452
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1245 APPPPPGEHSGIPFPTPPPPPPP 1267
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1283 PPPPPPPVDHSG 1294
>BX284695-1|CAI17374.1| 1435|Homo sapiens KIAA0460 protein.
Length = 1435
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1228 APPPPPGEHSGIPFPTPPPPPPP 1250
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1266 PPPPPPPVDHSG 1277
>AL611942-2|CAH70313.1| 1435|Homo sapiens KIAA0460 protein.
Length = 1435
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1228 APPPPPGEHSGIPFPTPPPPPPP 1250
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1266 PPPPPPPVDHSG 1277
>AL356356-11|CAI15496.1| 1435|Homo sapiens KIAA0460 protein.
Length = 1435
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1228 APPPPPGEHSGIPFPTPPPPPPP 1250
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1266 PPPPPPPVDHSG 1277
>BC045623-1|AAH45623.2| 1398|Homo sapiens KIAA0460 protein protein.
Length = 1398
Score = 28.7 bits (61), Expect(2) = 5.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP G + PPPPPPP
Sbjct: 1191 APPPPPGEHSGIPFPTPPPPPPP 1213
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 37 PPPPPPSXXXXG 2
PPPPPP G
Sbjct: 1229 PPPPPPPVDHSG 1240
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 25.4 bits (53), Expect(2) = 6.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPPS
Sbjct: 163 PPPPPPPS 170
Score = 24.6 bits (51), Expect(2) = 6.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPP 20
PP + PPPPPPP
Sbjct: 147 PPRPPAAQPRPPPSPPPPPPPP 168
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 25.4 bits (53), Expect(2) = 7.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 70 GSXTXHVXXXPPPPPPP 20
G T + PPPPPPP
Sbjct: 565 GPVTPPMPPPPPPPPPP 581
Score = 24.2 bits (50), Expect(2) = 7.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 584 PPPPPPPPPPLPG 596
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 25.4 bits (53), Expect(2) = 7.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPP 20
PP T PPPPPPP
Sbjct: 589 PPPPPPPGTDGPVPPPPPPPPP 610
Score = 24.2 bits (50), Expect(2) = 7.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 602 PPPPPPPPPPPGG 614
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 25.4 bits (53), Expect(2) = 7.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 70 GSXTXHVXXXPPPPPPP 20
G T + PPPPPPP
Sbjct: 462 GPVTPPMPPPPPPPPPP 478
Score = 24.2 bits (50), Expect(2) = 7.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 481 PPPPPPPPPPLPG 493
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 25.4 bits (53), Expect(2) = 7.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPP 20
PP T PPPPPPP
Sbjct: 480 PPPPPPPGTDGPVPPPPPPPPP 501
Score = 24.2 bits (50), Expect(2) = 7.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 493 PPPPPPPPPPPGG 505
>L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiesterase
protein.
Length = 809
Score = 25.8 bits (54), Expect(2) = 8.0
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 83 PPXXGXXHXXCXXXPPPPPP 24
PP C PPPPPP
Sbjct: 61 PPPSPQPQPQCPLQPPPPPP 80
Score = 23.8 bits (49), Expect(2) = 8.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 41 PPPPPPP 21
PPPPPPP
Sbjct: 82 PPPPPPP 88
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 25.4 bits (53), Expect(2) = 8.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPP 20
PP T PPPPPPP
Sbjct: 171 PPPPPPPGTDGPVPPPPPPPPP 192
Score = 24.2 bits (50), Expect(2) = 8.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 184 PPPPPPPPPPPGG 196
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 8.6
Identities = 30/127 (23%), Positives = 41/127 (32%)
Frame = +3
Query: 369 KQTXPXPQGSXXXXRPXTXDXXXRARXTXPAXQXTTXRNXNRTQAPGTPPXXEXRXXNKP 548
K+T P Q P T R + P T R R+ +P PP R P
Sbjct: 533 KETSPRMQMGKRWQSPVTKSGRRRRSPSPPP----TRRR--RSPSPAPPPRRR-RTPTPP 585
Query: 549 XXAPQAXKHXXGXSPXPRPXRXXXXNKKQPRPPDQSETPXXGXXEXRRRXNXXPPXTPGT 728
SP PR + P PP + T +RR + PP
Sbjct: 586 PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP-PPPPKRRASPSPPPKRRV 644
Query: 729 THAKPXR 749
+H+ P +
Sbjct: 645 SHSPPPK 651
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 8.6
Identities = 30/127 (23%), Positives = 41/127 (32%)
Frame = +3
Query: 369 KQTXPXPQGSXXXXRPXTXDXXXRARXTXPAXQXTTXRNXNRTQAPGTPPXXEXRXXNKP 548
K+T P Q P T R + P T R R+ +P PP R P
Sbjct: 533 KETSPRMQMGKRWQSPVTKSGRRRRSPSPPP----TRRR--RSPSPAPPPRRR-RTPTPP 585
Query: 549 XXAPQAXKHXXGXSPXPRPXRXXXXNKKQPRPPDQSETPXXGXXEXRRRXNXXPPXTPGT 728
SP PR + P PP + T +RR + PP
Sbjct: 586 PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP-PPPPKRRASPSPPPKRRV 644
Query: 729 THAKPXR 749
+H+ P +
Sbjct: 645 SHSPPPK 651
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.306 0.125 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,447,139
Number of Sequences: 237096
Number of extensions: 1828733
Number of successful extensions: 15757
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9892
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17559747370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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