Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_H06
(1237 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.023
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.023
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.023
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 0.066
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 0.17
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 26 0.90
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 0.92
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 0.94
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 26 1.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 25 1.5
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 25 2.1
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 25 2.1
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 25 2.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 25 2.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 25 2.8
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 30 2.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 24 5.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 24 5.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 24 6.2
AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical ... 29 6.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.8
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 9.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 9.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 9.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect(2) = 0.023
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP + G PPPPPPP G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 104 GGPXXXXPPXXGXXHXXCXXXPPPPPP 24
GGP PP G C PPPPPP
Sbjct: 756 GGPPPPPPPPGG-----CPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 48 GXXPPPPPPPXGXXXG 1
G PPPPPPP G G
Sbjct: 767 GCPPPPPPPPPGGFKG 782
Score = 27.1 bits (57), Expect(2) = 0.023
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPPP G G
Sbjct: 771 PPPPPPPGGFKGG 783
Score = 25.4 bits (53), Expect(2) = 3.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 766 GGCPPPPPPP 775
Score = 23.0 bits (47), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 36 PPPPPPXG 13
PPPPPP G
Sbjct: 784 PPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect(2) = 0.023
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP + G PPPPPPP G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 104 GGPXXXXPPXXGXXHXXCXXXPPPPPP 24
GGP PP G C PPPPPP
Sbjct: 756 GGPPPPPPPPGG-----CPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 48 GXXPPPPPPPXGXXXG 1
G PPPPPPP G G
Sbjct: 767 GCPPPPPPPPPGGFKG 782
Score = 27.1 bits (57), Expect(2) = 0.023
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPPP G G
Sbjct: 771 PPPPPPPGGFKGG 783
Score = 25.4 bits (53), Expect(2) = 3.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 766 GGCPPPPPPP 775
Score = 23.0 bits (47), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 36 PPPPPPXG 13
PPPPPP G
Sbjct: 784 PPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect(2) = 0.023
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP + G PPPPPPP G
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGG 350
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 104 GGPXXXXPPXXGXXHXXCXXXPPPPPP 24
GGP PP G C PPPPPP
Sbjct: 339 GGPPPPPPPPGG-----CPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 48 GXXPPPPPPPXGXXXG 1
G PPPPPPP G G
Sbjct: 350 GCPPPPPPPPPGGFKG 365
Score = 27.1 bits (57), Expect(2) = 0.023
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPPP G G
Sbjct: 354 PPPPPPPGGFKGG 366
Score = 25.4 bits (53), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 349 GGCPPPPPPP 358
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 36 PPPPPPXG 13
PPPPPP G
Sbjct: 367 PPPPPPPG 374
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 54 MXGXXPPPPPPPXG 13
M G PPPPPPP G
Sbjct: 585 MLGGPPPPPPPPGG 598
Score = 27.5 bits (58), Expect(2) = 0.066
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPP 19
PP + G PPPPPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPP 583
Score = 27.1 bits (57), Expect(2) = 0.066
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPPP G G
Sbjct: 589 PPPPPPPPGGLMG 601
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect(2) = 0.17
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 117 GWXGWGAXXXXPPXXGXRXXXMXGXXPPPPPPP 19
G G G P M G PPPPPPP
Sbjct: 25 GGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPP 57
Score = 23.4 bits (48), Expect(2) = 0.17
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPP G G
Sbjct: 55 PPPPPPMCGCGCG 67
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 26.2 bits (55), Expect(2) = 0.90
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPPS G
Sbjct: 364 PPPPPPPSAASNG 376
Score = 24.2 bits (50), Expect(2) = 0.90
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 52 VXXXPPPPPPP 20
V PPPPPPP
Sbjct: 359 VPPPPPPPPPP 369
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP G PPPPPPP G
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 98 PXXXXPPXXGXXHXXCXXXPPPPPPP 21
P PP G PPPPPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 26.2 bits (55), Expect(2) = 0.92
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
AP H PPPPPPP
Sbjct: 595 APNYGTPENRPHAVPPPPPPPPP 617
Score = 24.2 bits (50), Expect(2) = 0.92
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 609 PPPPPPPPPQSFG 621
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP G PPPPPPP G
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 98 PXXXXPPXXGXXHXXCXXXPPPPPPP 21
P PP G PPPPPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 26.2 bits (55), Expect(2) = 0.94
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
AP H PPPPPPP
Sbjct: 421 APNYGTPENRPHAVPPPPPPPPP 443
Score = 24.2 bits (50), Expect(2) = 0.94
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 40 PPPPPPPSXXXXG 2
PPPPPPP G
Sbjct: 435 PPPPPPPPPQSFG 447
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 25.8 bits (54), Expect(2) = 1.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPP 20
PP + V PPPPPPP
Sbjct: 500 PPLPPIATPSSVPPPPPPPPPP 521
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -3
Query: 98 PXXXXPPXXGXXHXXCXXXPPPPPPP 21
P PP PPPPPPP
Sbjct: 498 PPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPP+
Sbjct: 517 PPPPPPPA 524
Score = 22.2 bits (45), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 41 PPPPPPPL 18
PPPPPP L
Sbjct: 518 PPPPPPAL 525
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.4 bits (53), Expect(2) = 1.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPP 20
PP + + PPPPPPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPP 1362
Score = 24.2 bits (50), Expect(2) = 1.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPP+
Sbjct: 1357 PPPPPPPT 1364
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 63 GAPPPPPPPP 72
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPP G G
Sbjct: 67 PPPPPPAFGGLGG 79
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 63 GAPPPPPPPP 72
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPP G G
Sbjct: 67 PPPPPPAFGGLGG 79
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 48 GXXPPPPPPP 19
G PPPPPPP
Sbjct: 63 GAPPPPPPPP 72
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 39 PPPPPPPXGXXXG 1
PPPPPP G G
Sbjct: 67 PPPPPPAFGGLGG 79
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 24.6 bits (51), Expect(2) = 2.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 62 HXXCXXXPPPPPPP 21
H PPPPPPP
Sbjct: 148 HGATSSAPPPPPPP 161
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 41 PPPPPPPL 18
PPPPPPP+
Sbjct: 157 PPPPPPPV 164
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 24.6 bits (51), Expect(2) = 2.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 62 HXXCXXXPPPPPPP 21
H PPPPPPP
Sbjct: 148 HGATSSAPPPPPPP 161
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 41 PPPPPPPL 18
PPPPPPP+
Sbjct: 157 PPPPPPPV 164
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 100 GXXXAPPXXXGSXTXHVXXXPPPPPPP 20
G PP GS + PPPPPPP
Sbjct: 515 GRPMKPPSSSGSGSNRRSGPPPPPPPP 541
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = +3
Query: 555 APQAXKHXXGXSPXPRP--XRXXXXNKKQPRPPDQSETPXXGXXEXRRRXNXXPPXTPGT 728
APQ H P P P R + P PP TP RR PP TP +
Sbjct: 112 APQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRR-----PPMTPPS 166
Query: 729 THAKPXR 749
+P R
Sbjct: 167 PQRRPPR 173
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPP 19
PP R G PPPPPPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPP 144
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 98 PXXXXPPXXGXXHXXCXXXPPPPPPPL 18
P PP C PPPPPPP+
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPPM 73
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPP+
Sbjct: 250 PPPPPPPA 257
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP T ++ PP PPPP
Sbjct: 200 APPPPV-PLTSNIPQAPPAPPPP 221
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPP+
Sbjct: 236 PPPPPPPA 243
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP T ++ PP PPPP
Sbjct: 186 APPPPV-PLTSNIPQAPPAPPPP 207
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1
Query: 40 PPPPPPPS 17
PPPPPPP+
Sbjct: 236 PPPPPPPA 243
Score = 23.4 bits (48), Expect(2) = 6.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 88 APPXXXGSXTXHVXXXPPPPPPP 20
APP T ++ PP PPPP
Sbjct: 186 APPPPV-PLTSNIPQAPPAPPPP 207
>AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical
protein C53C7.3 protein.
Length = 213
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 85 PPXXXGSXTXHVXXXPPPPPPPS 17
PP HV PPPPPPP+
Sbjct: 161 PPEVQHVIHQHVFLQPPPPPPPA 183
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP G PPPPPPP G
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP G PPPPPPP G
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 84 PPXXGXRXXXMXGXXPPPPPPPXG 13
PP G PPPPPPP G
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRG 311
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.7 bits (61), Expect = 9.0
Identities = 22/98 (22%), Positives = 29/98 (29%), Gaps = 1/98 (1%)
Frame = +3
Query: 369 KQTXPXPQGSXXXXRPXTXDXXXRARXTXPAXQXTTXRNXNRTQAPGTPPXXEXRXXNKP 548
KQ P P T D + + T AP PP K
Sbjct: 641 KQAPPQPDPFGWDSSGHTGDAPTASEPVQELSPTPEASSSTGTSAPARPPPARPEAPKKD 700
Query: 549 XXAPQAXKHXXGX-SPXPRPXRXXXXNKKQPRPPDQSE 659
A A + P P R NK++P+ P+ E
Sbjct: 701 ETAVDAAAPPRPPPAARPPPPRPAPANKEKPKEPEPEE 738
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 48 GXXPPPPPPPXGXXXG 1
G PPPPPPP G G
Sbjct: 294 GMWPPPPPPPPGRTPG 309
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 48 GXXPPPPPPPXGXXXG 1
G PPPPPPP G G
Sbjct: 304 GMWPPPPPPPPGRTPG 319
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 117 GWXGWGAXXXXPPXXGXRXXXMXGXXPPPPPPP 19
GW G G P + G PPPPPPP
Sbjct: 649 GWYGSGGGSSMPMPVPP-PGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 117 GWXGWGAXXXXPPXXGXRXXXMXGXXPPPPPPP 19
GW G G P + G PPPPPPP
Sbjct: 649 GWYGSGGGSSMPMPVPP-PGGLGGFMPPPPPPP 680
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.306 0.125 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,236,309
Number of Sequences: 27780
Number of extensions: 215903
Number of successful extensions: 2072
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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