Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H04
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   5.3  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   5.3  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   5.3  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   9.3  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 71  TCHNSKCIPRXLLSAAFLVCVNAQVSMPPGY 163
           TC N  CIP+ L+  A L+      S P G+
Sbjct: 83  TCVNVGCIPKKLMHQASLLGEAIHDSQPYGW 113


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 71  TCHNSKCIPRXLLSAAFLVCVNAQVSMPPGY 163
           TC N  CIP+ L+  A L+      S P G+
Sbjct: 59  TCVNVGCIPKKLMHQASLLGEAIHDSQPYGW 89


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 71  TCHNSKCIPRXLLSAAFLVCVNAQVSMPPGY 163
           TC N  CIP+ L+  A L+      S P G+
Sbjct: 56  TCVNVGCIPKKLMHQASLLGEAIHDSQPYGW 86


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 309 KGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 419
           +G  N  F  D+   + GQ   T    P G   ++GG
Sbjct: 2   EGRDNNGFIGDNSPSIAGQYRWTTPAAPNGVHVTHGG 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,727
Number of Sequences: 2352
Number of extensions: 13564
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)