Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H04
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43672-1|AAC50390.1|  541|Homo sapiens IL-1Rrp protein.                30   9.6  
BC093977-1|AAH93977.1|  541|Homo sapiens interleukin 18 receptor...    30   9.6  
BC093975-1|AAH93975.1|  541|Homo sapiens interleukin 18 receptor...    30   9.6  
BC069575-1|AAH69575.1|  541|Homo sapiens interleukin 18 receptor...    30   9.6  
AC007248-3|AAY15048.1|  541|Homo sapiens unknown protein.              30   9.6  

>U43672-1|AAC50390.1|  541|Homo sapiens IL-1Rrp protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 663 RLDKHSCLVKPRSMNKILSKKIFIKID*FVTIYLRSVIS-SLITNIHLIFLNKNKN 827
           R +KHSC  + +  +KI+  K F +I    + Y   V S SL  N   + L  NKN
Sbjct: 113 RRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKN 168


>BC093977-1|AAH93977.1|  541|Homo sapiens interleukin 18 receptor 1
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 663 RLDKHSCLVKPRSMNKILSKKIFIKID*FVTIYLRSVIS-SLITNIHLIFLNKNKN 827
           R +KHSC  + +  +KI+  K F +I    + Y   V S SL  N   + L  NKN
Sbjct: 113 RRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKN 168


>BC093975-1|AAH93975.1|  541|Homo sapiens interleukin 18 receptor 1
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 663 RLDKHSCLVKPRSMNKILSKKIFIKID*FVTIYLRSVIS-SLITNIHLIFLNKNKN 827
           R +KHSC  + +  +KI+  K F +I    + Y   V S SL  N   + L  NKN
Sbjct: 113 RRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKN 168


>BC069575-1|AAH69575.1|  541|Homo sapiens interleukin 18 receptor 1
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 663 RLDKHSCLVKPRSMNKILSKKIFIKID*FVTIYLRSVIS-SLITNIHLIFLNKNKN 827
           R +KHSC  + +  +KI+  K F +I    + Y   V S SL  N   + L  NKN
Sbjct: 113 RRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKN 168


>AC007248-3|AAY15048.1|  541|Homo sapiens unknown protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 663 RLDKHSCLVKPRSMNKILSKKIFIKID*FVTIYLRSVIS-SLITNIHLIFLNKNKN 827
           R +KHSC  + +  +KI+  K F +I    + Y   V S SL  N   + L  NKN
Sbjct: 113 RRNKHSCFTERQVTSKIVEVKKFFQITCENSYYQTLVNSTSLYKNCKKLLLENNKN 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,488,160
Number of Sequences: 237096
Number of extensions: 2179073
Number of successful extensions: 9365
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9364
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)