Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_H04
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   1.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    23   3.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   3.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   4.9  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   6.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   6.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   8.6  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   8.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   8.6  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 DRGKLTGQAYGTRVLGPGGDSTSYGG 419
           D+  +TG AYG   + PG  S  + G
Sbjct: 66  DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 447 WRSHWPSLDDHRNWY 403
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 765 RSVISSLITNIHLIFLNKNKNNSY 836
           R +ISSL  N      N N NN+Y
Sbjct: 79  RKIISSLSNNYISNISNYNNNNNY 102


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 681 CLVKPRSMNKILSKKIFI 734
           CL+ PR +  ILS  ++I
Sbjct: 92  CLIDPRDVEIILSSNVYI 109


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 765 RSVISSLITNIHLIFLNKNKNNSY 836
           R +ISSL  N      N N NN+Y
Sbjct: 317 RKIISSLSNNYISNISNYNNNNNY 340


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 31  NSLRF*HSCLEQRNLSQFKMYSKXVVIRCIP 123
           N  RF   CLE  + S  K+ S+  VIR  P
Sbjct: 68  NKWRFLLQCLEDLDCSLRKLNSRLFVIRGQP 98


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 657 KCRLDKHSCLVKPRSMNKIL 716
           KC LD+  C  + R + KIL
Sbjct: 45  KCMLDEGPCTNEGRELKKIL 64


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 657 KCRLDKHSCLVKPRSMNKIL 716
           KC LD+  C  + R + KIL
Sbjct: 45  KCMLDEGPCTNEGRELKKIL 64


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 98  RXLLSAAFLVCVNAQVSMPP 157
           R LLSA++LVC    V   P
Sbjct: 209 RGLLSASYLVCYGIWVYFVP 228


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 98  RXLLSAAFLVCVNAQVSMPP 157
           R LLSA++LVC    V   P
Sbjct: 85  RGLLSASYLVCYGIWVYFVP 104


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 344 IIIEELPVITTFTKKSLVALSQSPEDLPSPH 252
           III++  V  T  +K ++ALS  P  L   H
Sbjct: 21  IIIQDDDVECTMVEKRVLALSTKPPFLVQLH 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,223
Number of Sequences: 438
Number of extensions: 4306
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)