BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_H02
(903 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 25 4.2
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 25 4.2
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 24 5.5
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 24 5.5
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 24 7.3
AF469165-1|AAL68692.1| 226|Anopheles gambiae amylase protein. 24 7.3
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 9.6
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 24.6 bits (51), Expect = 4.2
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +3
Query: 75 VVNLXAPNKSLVFGLILICSVGGQQFRYDYT--YFSEYQRVVEASGDSSYLARG-SIKMS 245
++ L A K + ILI +V G+ YDY F E + + S D + G I++S
Sbjct: 477 LLQLNATEKMIPKAKILIATVAGRTVVYDYADLDFQELRNNFDLSIDEQEIKPGRQIELS 536
Query: 246 FGRICIGFTSGRSFKKQHAVFDNK*EEFVW 335
+ ++ K +F NK + W
Sbjct: 537 MSGRPGAYVGLAAYDKALLLF-NKNHDLFW 565
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 24.6 bits (51), Expect = 4.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 154 RNCWPPTEQIRINP 113
RNCWP + +NP
Sbjct: 193 RNCWPKVRGVAMNP 206
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 808 WNEHGEWLTINGETLQXAGYDKWSAG 885
W ++INGE L G D W+ G
Sbjct: 276 WTPDNITVSINGEDLATIGGDFWTRG 301
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 808 WNEHGEWLTINGETLQXAGYDKWSAG 885
W ++INGE L G D W+ G
Sbjct: 276 WTPDNITVSINGEDLATIGGDFWTRG 301
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 334 GIYTGIHALFSRGDFRSIEGVPLAK 408
G G+ + +G F EG PLAK
Sbjct: 136 GYLAGVPVMCMQGRFHHYEGYPLAK 160
>AF469165-1|AAL68692.1| 226|Anopheles gambiae amylase protein.
Length = 226
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 625 FHKVPRTWSRAYMTCLAEGGYLTIINSQQEAT 720
F+ P T + CL G Y II+ +++ T
Sbjct: 161 FNAGPETSDGIWKACLPPGEYCDIISGERDGT 192
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.4 bits (48), Expect = 9.6
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 250 EGSVLASPLDAALKSSMLSLITNKKSSCGIYTGIHALFSRGDFRSIEGVPLAKIPHDWAD 429
+G A + KSS+LS + S CG+ G + G+ S + + L A
Sbjct: 1077 DGGDAARDVRERRKSSLLSTQEREGSHCGVSGGGSISLAVGNSDSSQ-LSLVNGKGSEAT 1135
Query: 430 YEP-DNAGGDE 459
P DNAGG E
Sbjct: 1136 TAPSDNAGGAE 1146
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 920,833
Number of Sequences: 2352
Number of extensions: 20447
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -