Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_G23
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical...    29   5.8  
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.6 protein.
          Length = 271

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 397 LRSYLNSIRHFYIYYVTLCYVVPRLY**YLTYHSYCLSQSDRVHI 531
           ++S +  I H YI Y    Y + ++Y  Y  YH Y  ++S   HI
Sbjct: 18  IKSTIYYIYHIYIPYTI--YTIHQIYHIYYIYHIYTYTKSPIYHI 60


>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6b protein.
          Length = 1345

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +3

Query: 48  LXXSXRSRRTLLXWNFXFSGT-IAFR*NXFRTYFELRLRVGAGSRRGQRCS*AQVETLQE 224
           L  +    R L   +F + G  I    N    YF +R R+  G++RG+R S +  +   E
Sbjct: 610 LQEAFAGHRKLSKGHFQYIGDKIGLTANFVSNYFTIRKRMSKGAKRGERLSDSDDDD-DE 668

Query: 225 N*ESGTQRSRWINQSGSSYSRHRASEILRKIDFM 326
             + G +++   N+  +  +  +A +  +  + +
Sbjct: 669 PEDDGEEKNEEKNEEEARKAAEKAEKAQKMTEML 702


>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6a protein.
          Length = 1343

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +3

Query: 48  LXXSXRSRRTLLXWNFXFSGT-IAFR*NXFRTYFELRLRVGAGSRRGQRCS*AQVETLQE 224
           L  +    R L   +F + G  I    N    YF +R R+  G++RG+R S +  +   E
Sbjct: 608 LQEAFAGHRKLSKGHFQYIGDKIGLTANFVSNYFTIRKRMSKGAKRGERLSDSDDDD-DE 666

Query: 225 N*ESGTQRSRWINQSGSSYSRHRASEILRKIDFM 326
             + G +++   N+  +  +  +A +  +  + +
Sbjct: 667 PEDDGEEKNEEKNEEEARKAAEKAEKAQKMTEML 700


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,845,229
Number of Sequences: 27780
Number of extensions: 212709
Number of successful extensions: 455
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)