Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_G22
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 295 4e-80
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 295 4e-80
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 111 5e-25
Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF026215-6|AAB71325.1| 516|Caenorhabditis elegans Hypothetical ... 31 1.4
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.3
AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h at... 29 4.4
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 7.7
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 295 bits (723), Expect = 4e-80
Identities = 136/246 (55%), Positives = 172/246 (69%), Gaps = 2/246 (0%)
Frame = +3
Query: 147 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 326
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 327 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 503
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 504 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 683
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 684 LEADWDFLPPKKIKDPEAKKPEDWDDKPTIQTPKTRSLRIGTSLNTF-QIRCHQT*NWDD 860
LE DWD LP KKIKDP+AKKPEDWD++ I + + +WDD
Sbjct: 191 LEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDD 250
Query: 861 EMDGXW 878
EMDG W
Sbjct: 251 EMDGEW 256
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 295 bits (723), Expect = 4e-80
Identities = 136/246 (55%), Positives = 172/246 (69%), Gaps = 2/246 (0%)
Frame = +3
Query: 147 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 326
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 327 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 503
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 504 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 683
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 684 LEADWDFLPPKKIKDPEAKKPEDWDDKPTIQTPKTRSLRIGTSLNTF-QIRCHQT*NWDD 860
LE DWD LP KKIKDP+AKKPEDWD++ I + + +WDD
Sbjct: 191 LEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDD 250
Query: 861 EMDGXW 878
EMDG W
Sbjct: 251 EMDGEW 256
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 111 bits (268), Expect = 5e-25
Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Frame = +3
Query: 279 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 449
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 450 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDV 599
+ + +T Y IMFGPD CG T KVH+IF YK + + DD
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDH 225
Query: 600 YTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWD--FLPPKKIKDPEAKKPEDWDDKPTI 773
THL+TL+VKP Y V +D + + G++ +D PPK+I D KP DWD++ I
Sbjct: 226 NTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDERENI 285
Query: 774 Q 776
+
Sbjct: 286 E 286
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 624 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDD 761
VKPD+ E + E+ DW+ + I DPEAKKP+DWD+
Sbjct: 291 VKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDE 336
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 657 DNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPT--IQTPKTRSLRIGTSLNTFQI 830
+N + ES DWD P+ + D A KP DW+++ I P+ + +
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQ---------- 332
Query: 831 RCHQT*NWDDEMDGXW 878
+WD++MDG W
Sbjct: 333 ------DWDEDMDGSW 342
>Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical
protein F37A8.2 protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.62
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +3
Query: 693 DWDFLPPKKIKDPEAKKPEDWDDKPTI--------QTPKTRSLRIGTSLNTFQIRCHQT* 848
+W L P + AK ++ P I ++PKT LR+ TFQ +
Sbjct: 55 NWAPLSPNPETEKSAKSLRNYSTNPLIPSYICDLCESPKTSELRVAHDAPTFQTTYSYSI 114
Query: 849 NWDDEMD 869
+WD EMD
Sbjct: 115 SWDVEMD 121
>Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical
protein T27E7.4 protein.
Length = 350
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/29 (37%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
Frame = -2
Query: 847 QVWWHLIWNVFR---LVPILRLLVFGVWI 770
Q++W L++N F+ +VPIL +++ G+W+
Sbjct: 22 QLYWWLVYNYFKELIIVPILFIVLAGIWL 50
>AF026215-6|AAB71325.1| 516|Caenorhabditis elegans Hypothetical
protein F09G2.8 protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 208 TQLLSHESSGNFSSKNTSQFIEDNASKLTTTKYNSFHFRFTVPPSSN 68
T L HE N KNT D + +T + + F R VP S N
Sbjct: 6 TYLTPHEKEENGERKNTRMETHDGRADMTNFEMDLFDTRIEVPTSKN 52
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 555 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 677
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 555 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 677
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 714 KKIKDPEAKKPEDWDDKPTIQTPKTRS 794
+++K P+ K PE DDKP T K +S
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEKS 1640
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 714 KKIKDPEAKKPEDWDDKPTIQTPKTRS 794
+++K P+ K PE DDKP T K +S
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEKS 1640
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 714 KKIKDPEAKKPEDWDDKPTIQTPKTRS 794
+++K P+ K PE DDKP T K +S
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEKS 1640
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 714 KKIKDPEAKKPEDWDDKPTIQTPKTRS 794
+++K P+ K PE DDKP T K +S
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEKS 1640
>AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h
atpase protein 8 protein.
Length = 226
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 660 NEKVESGDLEADWDFLPPK-KIKDPEAKKPEDWDDKPTIQTPKTRSLRIGTSLNTFQIRC 836
NEK E D +A+ +F K ++ + +K ++ +K Q R ++ SLN ++RC
Sbjct: 24 NEKAEEIDAKAEEEFNIEKGRLVQQQRQKIMEFFEKKEKQVELQRKIQASNSLNAGRLRC 83
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 600 YTHLYTLIVKPDN-TYEVLIDNEKVESGDLEADWDFLPP 713
+TH +TL VKP N Y+ DN+ ++ E F P
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQP 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,198,459
Number of Sequences: 27780
Number of extensions: 495276
Number of successful extensions: 1644
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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