Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_G17
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0326 - 8976913-8976963,8977453-8977521,8978247-8978438,897...   210   1e-54
12_02_0476 + 19493278-19493349,19493595-19494209,19494352-194945...   207   1e-53
08_02_1428 + 27027787-27027999,27029345-27029524,27029700-270298...    30   2.8  
01_03_0028 - 11783122-11783381,11783668-11784163                       29   3.7  
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431...    29   6.5  
04_04_0809 - 28236216-28236679,28236776-28236899,28237049-282371...    29   6.5  

>02_02_0326 -
           8976913-8976963,8977453-8977521,8978247-8978438,
           8978597-8978764,8978902-8979513,8979765-8979815
          Length = 380

 Score =  210 bits (512), Expect = 1e-54
 Identities = 100/198 (50%), Positives = 129/198 (65%)
 Frame = +3

Query: 228 LSDLHGRRHNYLRISLTERCNLRCKYCMPAEGVPXXXXXXXXXXXXXXXIVGALAAAXVD 407
           L D  GR HNYLRISLTERCNLRC+YCMPA+GV                + G    + VD
Sbjct: 67  LVDSFGRFHNYLRISLTERCNLRCQYCMPAQGVQLTPNSELLSHDEIIRVAGLFVTSGVD 126

Query: 408 KLRLTGGEPTLRSDLADIIQSLKAIDGIRSVSMTTNGLVLARRLASLQRAGLDAVNVSLD 587
           K+RLTGGEPT+R D+ DI   L  + G+++++MTTNGLVL+++L  L+  GL+A+N+SLD
Sbjct: 127 KIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPRLKECGLNALNISLD 186

Query: 588 TLRPDRYEDMXXXXXXXXXXXXXXXXXQLGYSPVKINTVLMRGFNDDEIGDFIEMTRERD 767
           TL P ++E M                 QLG+  VK+N V+MRG NDDEI DF+EMTR++ 
Sbjct: 187 TLVPAKFEFMTRRKGHSRVMESIDASIQLGFQSVKVNCVVMRGMNDDEICDFVEMTRDKP 246

Query: 768 LEVRFIEFMPFAGNXXEV 821
           + VRFIEFMPF GN   V
Sbjct: 247 VNVRFIEFMPFDGNVWNV 264


>12_02_0476 +
           19493278-19493349,19493595-19494209,19494352-19494519,
           19494677-19494868,19495604-19495672,19496461-19496544
          Length = 399

 Score =  207 bits (505), Expect = 1e-53
 Identities = 99/198 (50%), Positives = 128/198 (64%)
 Frame = +3

Query: 228 LSDLHGRRHNYLRISLTERCNLRCKYCMPAEGVPXXXXXXXXXXXXXXXIVGALAAAXVD 407
           L D  GR HNYLRISLTERCNLRC+YCMPAEGV                +      + VD
Sbjct: 75  LVDSFGRFHNYLRISLTERCNLRCQYCMPAEGVELTPSSELLSHDEIIRVADLFVTSGVD 134

Query: 408 KLRLTGGEPTLRSDLADIIQSLKAIDGIRSVSMTTNGLVLARRLASLQRAGLDAVNVSLD 587
           K+RLTGGEPT+R D+ DI   L  + G+++++MTTNGLVL+++L  L+  GL+A+N+SLD
Sbjct: 135 KIRLTGGEPTIRKDIEDICLHLSGLKGLKTLAMTTNGLVLSKKLPRLKECGLNALNISLD 194

Query: 588 TLRPDRYEDMXXXXXXXXXXXXXXXXXQLGYSPVKINTVLMRGFNDDEIGDFIEMTRERD 767
           TL P ++E M                 +LG+  VK+N V+MRG NDDEI DF+EMTR++ 
Sbjct: 195 TLVPAKFEFMTRRKGHSRVMESIDAAIELGFQSVKVNCVVMRGMNDDEICDFVEMTRDKP 254

Query: 768 LEVRFIEFMPFAGNXXEV 821
           + VRFIEFMPF GN   V
Sbjct: 255 VNVRFIEFMPFDGNVWNV 272


>08_02_1428 +
           27027787-27027999,27029345-27029524,27029700-27029806,
           27030156-27030361,27030749-27030888,27031038-27031337
          Length = 381

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 441 RSDLADIIQSLKAIDGIRSVSMTTNGLVLARRLASLQRAGLDAVNVSLDTLR 596
           +++   I++ +K I G+      T G++  ++   L++AGL A N +LDT R
Sbjct: 153 KTNFNQILEYVKDIRGMGMEVCCTLGMLEKQQAEELKKAGLTAYNHNLDTSR 204


>01_03_0028 - 11783122-11783381,11783668-11784163
          Length = 251

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 821 DFXXVAGKWHEFYEPDLEVALAGHLYEI 738
           D+   A  ++ F++PD +V L  HLY++
Sbjct: 202 DWPHTADVYYRFFDPDRDVGLVEHLYKV 229


>09_06_0132 -
           21042653-21042873,21042950-21043027,21043106-21043167,
           21043504-21043578,21043664-21043752,21043825-21043905,
           21044939-21045076,21046299-21046429,21046521-21046592,
           21047218-21047275,21047362-21047461,21047544-21047617,
           21047701-21047836,21047913-21048137,21048211-21048446,
           21048949-21049081,21049195-21049484
          Length = 732

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 238 YMVVDTTTCEYLSLSDATCDASTACRRKACPCP 336
           Y    +TT   +  S   CD   ACR K+  CP
Sbjct: 148 YSPAQSTTSRKVPCSSNLCDLQNACRSKSNSCP 180


>04_04_0809 -
           28236216-28236679,28236776-28236899,28237049-28237191,
           28237697-28237832,28238413-28238888,28238940-28239024
          Length = 475

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 411 LRLTGGEPTLRSDLADIIQSLKAIDGIRS 497
           LR   G+P  R  +A+++Q+L  I+ IRS
Sbjct: 397 LRCLSGDPRSRPSMAEVVQALVEIERIRS 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,162,844
Number of Sequences: 37544
Number of extensions: 459460
Number of successful extensions: 1450
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)