Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_G17
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81545-5|CAB04440.1|  389|Caenorhabditis elegans Hypothetical pr...   176   1e-44
Z46267-2|CAC42301.1|  600|Caenorhabditis elegans Hypothetical pr...   176   1e-44
Z46267-1|CAC42302.1|  389|Caenorhabditis elegans Hypothetical pr...   176   1e-44
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC024847-8|AAF60857.1|  377|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z81545-5|CAB04440.1|  389|Caenorhabditis elegans Hypothetical
           protein F49H6.5 protein.
          Length = 389

 Score =  176 bits (429), Expect = 1e-44
 Identities = 88/202 (43%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
 Frame = +3

Query: 207 RVEAAASLSDLHGRRHNYLRISLTERCNLRCKYCMPAEGVPXXXXXXXXXXXXXXXIVGA 386
           R +      D+  R H YLRISLTE+CN RC YCMPAEG+P               +V  
Sbjct: 58  RAKGQLPFFDMFMREHTYLRISLTEKCNFRCLYCMPAEGIPLKPKDKMLSNSEVLRLVKL 117

Query: 387 LAAAXVDKLRLTGGEPTLRSDLADIIQSLKAIDGIRSVSMTTNGLVLARRLASLQRAGLD 566
            AA  VDK+RLTGGEPT+R+DL  I++ + +  GI+ V +TTNGLVL R L  L+ AGL 
Sbjct: 118 FAAHGVDKVRLTGGEPTIRNDLVQIVEGISSTPGIKEVGITTNGLVLPRFLPKLKDAGLT 177

Query: 567 AVNVSLDTLRPDRYEDMXXXXXXXXXXXXXXXXXQLGYSP-VKINTVLMRGFNDDEIGDF 743
            +N+S+D+L  +++  M                   GY P VK+N V+++  N++EI DF
Sbjct: 178 KINISIDSLDREKFAKMTRRDGFDKVWKAIELAR--GYFPKVKLNVVVLKHQNENEIVDF 235

Query: 744 IEMTRERDLEVRFIEFMPFAGN 809
           + +T+ R+L++RFIEFMPF GN
Sbjct: 236 VNLTKGRNLDIRFIEFMPFGGN 257


>Z46267-2|CAC42301.1|  600|Caenorhabditis elegans Hypothetical
           protein F49E2.1b protein.
          Length = 600

 Score =  176 bits (429), Expect = 1e-44
 Identities = 87/193 (45%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
 Frame = +3

Query: 234 DLHGRRHNYLRISLTERCNLRCKYCMPAEGVPXXXXXXXXXXXXXXXIVGALAAAXVDKL 413
           D+  R H YLRISLTE+CN RC YCMPAEGVP               +V   AA  VDK+
Sbjct: 67  DMFMREHTYLRISLTEKCNFRCLYCMPAEGVPLKPKDKMLSNSEVLRLVKLFAAHGVDKV 126

Query: 414 RLTGGEPTLRSDLADIIQSLKAIDGIRSVSMTTNGLVLARRLASLQRAGLDAVNVSLDTL 593
           RLTGGEPT+R D+  I++ + +  GI+ V +TTNGLVL R L  L+ AGL  +N+S+D+L
Sbjct: 127 RLTGGEPTIRKDIVHIVEGISSTPGIKEVGITTNGLVLQRFLPQLRDAGLTKINISIDSL 186

Query: 594 RPDRYEDMXXXXXXXXXXXXXXXXXQLGYSP-VKINTVLMRGFNDDEIGDFIEMTRERDL 770
             +++  M                   GY P VK+N V+++  N++E+ DF+ +T++R+L
Sbjct: 187 DREKFAKMTRRDGFDKVWKAIELAR--GYYPKVKLNVVVLKHQNENEVVDFVNLTKDRNL 244

Query: 771 EVRFIEFMPFAGN 809
           +VRFIEFMPF GN
Sbjct: 245 DVRFIEFMPFGGN 257


>Z46267-1|CAC42302.1|  389|Caenorhabditis elegans Hypothetical
           protein F49E2.1a protein.
          Length = 389

 Score =  176 bits (429), Expect = 1e-44
 Identities = 87/193 (45%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
 Frame = +3

Query: 234 DLHGRRHNYLRISLTERCNLRCKYCMPAEGVPXXXXXXXXXXXXXXXIVGALAAAXVDKL 413
           D+  R H YLRISLTE+CN RC YCMPAEGVP               +V   AA  VDK+
Sbjct: 67  DMFMREHTYLRISLTEKCNFRCLYCMPAEGVPLKPKDKMLSNSEVLRLVKLFAAHGVDKV 126

Query: 414 RLTGGEPTLRSDLADIIQSLKAIDGIRSVSMTTNGLVLARRLASLQRAGLDAVNVSLDTL 593
           RLTGGEPT+R D+  I++ + +  GI+ V +TTNGLVL R L  L+ AGL  +N+S+D+L
Sbjct: 127 RLTGGEPTIRKDIVHIVEGISSTPGIKEVGITTNGLVLQRFLPQLRDAGLTKINISIDSL 186

Query: 594 RPDRYEDMXXXXXXXXXXXXXXXXXQLGYSP-VKINTVLMRGFNDDEIGDFIEMTRERDL 770
             +++  M                   GY P VK+N V+++  N++E+ DF+ +T++R+L
Sbjct: 187 DREKFAKMTRRDGFDKVWKAIELAR--GYYPKVKLNVVVLKHQNENEVVDFVNLTKDRNL 244

Query: 771 EVRFIEFMPFAGN 809
           +VRFIEFMPF GN
Sbjct: 245 DVRFIEFMPFGGN 257


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/66 (24%), Positives = 21/66 (31%)
 Frame = +1

Query: 238 YMVVDTTTCEYLSLSDATCDASTACRRKACPCPVAARCCQWRSCG**WARWRPPAWTSCG 417
           Y  +D+    Y +    T            P P    CC        W  W     T+CG
Sbjct: 619 YFPLDSCCAGYTATVSGTLHICGPQPTTTTPAPNDETCCPLDGIWGAWGEWSVCTGTTCG 678

Query: 418 SPAGSR 435
           +  GSR
Sbjct: 679 NCGGSR 684


>AC024847-8|AAF60857.1|  377|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.1 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 147 VLRSHSKIRYKDEKLLVRIFILLRSAYCTYVNKNQN 40
           +++SH +I YK +  L+ +FI      C Y N  +N
Sbjct: 152 IIQSHKEIDYKTDWKLINVFIGAND-MCAYCNDREN 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,953,109
Number of Sequences: 27780
Number of extensions: 327086
Number of successful extensions: 983
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)