Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_G16
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.5  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    22   8.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 305 PTSGAHMNPAVTLAAALQGRMSP 373
           P SG H + A  LAA L G + P
Sbjct: 515 PPSGHHASSAPLLAATLAGGLCP 537


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 181  RGQQLGDPALATIAAPSRTNRAAYLRLW 98
            +GQ  G P  AT  +P+ T     L +W
Sbjct: 1495 QGQAPGIPPAATFLSPNSTTLVLRLHVW 1522


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 181  RGQQLGDPALATIAAPSRTNRAAYLRLW 98
            +GQ  G P  AT  +P+ T     L +W
Sbjct: 1491 QGQAPGIPPAATFLSPNSTTLVLRLHVW 1518


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 354 SAAASVTAGFMCAPDVGPNAIALPS 280
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 354 SAAASVTAGFMCAPDVGPNAIALPS 280
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 354 SAAASVTAGFMCAPDVGPNAIALPS 280
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 220 RHHGADAEPHEERRGQQLGDPALATIAAPSR 128
           R  G   +P  ++R  +LG PA  T   P R
Sbjct: 12  RATGGKRKPIRKKRKFELGRPAANTKLGPQR 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,890
Number of Sequences: 438
Number of extensions: 3129
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)