BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_G14
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 34 0.80
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 34 0.80
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 34 0.80
BC047881-1|AAH47881.1| 413|Homo sapiens family with sequence si... 30 9.9
AL138824-5|CAI12251.1| 413|Homo sapiens family with sequence si... 30 9.9
AF097027-1|AAF07850.1| 413|Homo sapiens autosomal highly conser... 30 9.9
AF097026-1|AAF07849.1| 413|Homo sapiens autosomal highly conser... 30 9.9
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 151 TGQHFPTXKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 288
T + P P G H + P P +P HDF D+ GPCD P
Sbjct: 376 THRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 151 TGQHFPTXKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 288
T + P P G H + P P +P HDF D+ GPCD P
Sbjct: 376 THRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 151 TGQHFPTXKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 288
T + P P G H + P P +P HDF D+ GPCD P
Sbjct: 376 THRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDY-GPCDPP 420
>BC047881-1|AAH47881.1| 413|Homo sapiens family with sequence
similarity 8, member A1 protein.
Length = 413
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 113 YLLFCLWQLSVTSPGNIFQRXNARKVNIQFCIALKWPSRTVRIPKSTISLTT 268
Y + C+W +PG + IA PSR + IP S +S+TT
Sbjct: 318 YEIICIWGAGGATPGKFLLGLRVVTCDTSVLIA---PSRVLVIPSSNVSITT 366
>AL138824-5|CAI12251.1| 413|Homo sapiens family with sequence
similarity 8, member A1 protein.
Length = 413
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 113 YLLFCLWQLSVTSPGNIFQRXNARKVNIQFCIALKWPSRTVRIPKSTISLTT 268
Y + C+W +PG + IA PSR + IP S +S+TT
Sbjct: 318 YEIICIWGAGGATPGKFLLGLRVVTCDTSVLIA---PSRVLVIPSSNVSITT 366
>AF097027-1|AAF07850.1| 413|Homo sapiens autosomal highly conserved
protein protein.
Length = 413
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 113 YLLFCLWQLSVTSPGNIFQRXNARKVNIQFCIALKWPSRTVRIPKSTISLTT 268
Y + C+W +PG + IA PSR + IP S +S+TT
Sbjct: 318 YEIICIWGAGGATPGKFLLGLRVVTCDTSVLIA---PSRVLVIPSSNVSITT 366
>AF097026-1|AAF07849.1| 413|Homo sapiens autosomal highly conserved
protein protein.
Length = 413
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 113 YLLFCLWQLSVTSPGNIFQRXNARKVNIQFCIALKWPSRTVRIPKSTISLTT 268
Y + C+W +PG + IA PSR + IP S +S+TT
Sbjct: 318 YEIICIWGAGGATPGKFLLGLRVVTCDTSVLIA---PSRVLVIPSSNVSITT 366
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,646,000
Number of Sequences: 237096
Number of extensions: 1383687
Number of successful extensions: 2894
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2894
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -