Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_G07
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 146 1e-34
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 146 1e-34
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 146 1e-34
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 146 1e-34
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 80 1e-14
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 5e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 2e-05
AF399506-1|AAK94991.1| 216|Homo sapiens olfactory receptor prot... 32 3.1
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 31 5.5
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 31 5.5
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 31 5.5
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 146 bits (353), Expect = 1e-34
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +2
Query: 122 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 301
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 302 NKKTRHMLPNGFRKVL 349
NKKT+HMLP+GFRK L
Sbjct: 63 NKKTKHMLPSGFRKFL 78
Score = 90.6 bits (215), Expect = 6e-18
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +3
Query: 354 HNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 521
HNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLRS+ENE
Sbjct: 80 HNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 146 bits (353), Expect = 1e-34
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +2
Query: 122 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 301
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 302 NKKTRHMLPNGFRKVL 349
NKKT+HMLP+GFRK L
Sbjct: 63 NKKTKHMLPSGFRKFL 78
Score = 90.6 bits (215), Expect = 6e-18
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +3
Query: 354 HNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 521
HNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLRS+ENE
Sbjct: 80 HNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 146 bits (353), Expect = 1e-34
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +2
Query: 122 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 301
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 302 NKKTRHMLPNGFRKVL 349
NKKT+HMLP+GFRK L
Sbjct: 63 NKKTKHMLPSGFRKFL 78
Score = 90.6 bits (215), Expect = 6e-18
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +3
Query: 354 HNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 521
HNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLRS+ENE
Sbjct: 80 HNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 146 bits (353), Expect = 1e-34
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +2
Query: 122 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 301
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 302 NKKTRHMLPNGFRKVL 349
NKKT+HMLP+GFRK L
Sbjct: 63 NKKTKHMLPSGFRKFL 78
Score = 90.6 bits (215), Expect = 6e-18
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +3
Query: 354 HNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 521
HNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLRS+ENE
Sbjct: 80 HNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 79.8 bits (188), Expect = 1e-14
Identities = 48/108 (44%), Positives = 61/108 (56%)
Frame = +3
Query: 198 MTNLRGIGVNLEVLTTESAGGSRVNT*CPTLVTVPTRRPVICSQMDSVRS*XHNVKELEI 377
M+ LR G N EVLTT G R + P + ++ + HNVKELE+
Sbjct: 1 MSKLRVTGGNTEVLTTGFIEGLRARS-MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEV 59
Query: 378 LMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 521
L++ N+ YC EI H VSSK K I+ERA Q+ IRVTNA A L S E+E
Sbjct: 60 LLVSNKSYCVEITHDVSSKNCKAILERAAQVVIRVTNANASLHSAESE 107
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 5e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 122 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 214
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 122 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 211
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>AF399506-1|AAK94991.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 32 EFLKILSFPFSCGRVTAWFTVAFLKETYKMAIRPVYRPTIVKKRTKRF 175
+FL+++ F SC T FT+A + +Y IR + R +RTK F
Sbjct: 126 KFLEVMGF--SCAAFTLMFTLALIFLSYIYIIRTILRIPSTSQRTKAF 171
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 209 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 331
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 209 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 331
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 209 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 331
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,817,188
Number of Sequences: 237096
Number of extensions: 1765825
Number of successful extensions: 5549
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5548
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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