Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_G03
(944 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 33 0.25
03_01_0515 - 3864796-3865425 32 0.76
10_03_0023 - 7151465-7152111,7152222-7152405 31 1.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.0
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.3
01_05_0490 + 22672241-22674679 30 2.3
12_02_0299 - 17051570-17052474,17053542-17053755 29 4.1
08_02_1615 + 28257275-28258428,28258523-28259144 29 4.1
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.4
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 7.1
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 29 7.1
07_01_0516 - 3850252-3852870 28 9.4
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.5 bits (73), Expect = 0.25
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 713 PNGKTPCXXXLLPVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPP 549
P KTP +P P P P PP P PP P PPP PP
Sbjct: 111 PEFKTPPALSPVPPPPPPPRTRTRVEPPHRPPPV-KPQPPPSLPPPPPPPPPPPP 164
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 698 PCXXXLLPVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPP 549
P L+P P P P+ + PP P PP P PPP+ PP
Sbjct: 64 PAAGPLMPPPPPPPSVTSS-----PPPPPLPPPPPPPAASPPPPPPSPPP 108
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 713 PNGKTPCXXXLLP--VPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPP 549
PN TP L+P P P P L PP P P P PPP PP
Sbjct: 189 PNPITPAPPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPLLNPPPPPPPPP 245
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -1
Query: 677 PVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPPL 546
P P P P N+ PP P P P PPP PP+
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPI 611
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = -3
Query: 702 NPXQXXPXSXPXPFXXLXFKFFXLPXPPXFLXTLXPPXGXXXTXAPPQXPPVAXXL-RRK 526
+P P P P + P PP PP +PP PP L R
Sbjct: 562 SPPPPPPPPPPPPLPQSNYASSQPPPPPP-----PPPLPNCLVPSPPPPPPPPPILPNRS 616
Query: 525 XKXPPXPNPXSPXFS 481
PP P P P S
Sbjct: 617 VPPPPPPPPPLPNHS 631
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -3
Query: 630 PXPPXFLXTLXPPXGXXX-TXAPPQXPPVAXXLRRKXKXPPXPNPXSPXFS 481
P PP L T PP T APP PP A PP P P P S
Sbjct: 90 PPPPPLLPTPPPPPASISPTPAPPLPPPPA------PAPPPTPTPKFPSSS 134
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 594 PXGXXXTXAPPQXPPVAXXLRRKXKXPPXPNPXSP 490
P T PP PP RR + PP P P P
Sbjct: 63 PTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLP 97
>01_05_0490 + 22672241-22674679
Length = 812
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -1
Query: 677 PVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPPL 546
P P P P F+ + P PP P PPP PP+
Sbjct: 664 PPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLPPPPPPPPPPM 707
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = -1
Query: 698 PCXXXLLPVPXPXPAXXLNF--FXCLXPPXF*XPYXPPXXXXXPXPPPNXPPLXFX*GGX 525
P L P P PA + PP F P+ PP PPP P F
Sbjct: 245 PPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQL 304
Query: 524 XXAPH 510
PH
Sbjct: 305 PPLPH 309
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 677 PVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPP 549
P P P P F PP P P P PPP PP
Sbjct: 287 PSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPP 329
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -3
Query: 597 PPXGXXXTXAPPQXPPVAXXLRRKXKXPPXPNPXSPXFSRFLY 469
PP T PP+ PP ++ PP P P +P F +
Sbjct: 59 PPPPAPLTPPPPKSPPPPPHIQTTDLPPPKPLPPAPLRQLFSF 101
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -1
Query: 680 LPVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPP--PNXPP 549
+P P P P+ N L PP P PP P PP P PP
Sbjct: 596 VPRPPPAPSATANTASALPPP----PPRPPGAPPPPPPPGKPGGPP 637
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -1
Query: 680 LPVPXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPP--PNXPP 549
+P P P P+ N L PP P PP P PP P PP
Sbjct: 901 VPRPPPAPSATANTASALSPP----PPRPPGAPPPPPPPGKPGGPP 942
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 630 PXPPXFLXTLXPPXGXXXTXAPPQXPPVAXXLRRKXKXPPXPNP 499
P PP PP APP PP K PP P P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 671 PXPXPAXXLNFFXCLXPPXF*XPYXPPXXXXXPXPPPNXPP 549
P P P +N PP P PP P PPP PP
Sbjct: 93 PPPPPPYGVNSSQPPPPPPP-PPSPPPSAPPPPPPPPTQPP 132
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 633 LPXPPXFLXTLXPPXGXXXTXAPPQXP-PVAXXLRRKXKXPPXPNPXSP 490
LP P PP APPQ P P L + + PP P+ P
Sbjct: 215 LPPSPHGRAVPGPPCHRHHVIAPPQWPDPYRPDLTSEARDPPPPHTAPP 263
>07_01_0516 - 3850252-3852870
Length = 872
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 623 PPXF*XPYXPPXXXXXPXPPPNXPP 549
PP P PP P PPP PP
Sbjct: 11 PPRLLPPQPPPTSRPLPPPPPPPPP 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,664,765
Number of Sequences: 37544
Number of extensions: 171347
Number of successful extensions: 1321
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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