Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_F22
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical pr... 249 2e-66
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 32 0.44
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 31 0.77
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 31 0.77
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 31 0.77
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 31 0.77
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 31 0.77
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 29 3.1
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 29 5.4
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 28 7.2
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 28 7.2
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 28 7.2
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 28 7.2
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 28 7.2
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 7.2
Z69884-1|CAA93748.1| 313|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical
protein F40F8.10 protein.
Length = 189
Score = 249 bits (610), Expect = 2e-66
Identities = 122/161 (75%), Positives = 140/161 (86%), Gaps = 1/161 (0%)
Frame = +1
Query: 109 RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 288
R+ +V SK +PRRPFEK RLDQELK+IG +GL+NKREVWRVKYTLA++RKAARELLTL
Sbjct: 3 RLKTVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTL 62
Query: 289 EEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSI 468
E+KDPKRLFEGNALLRRLV+IGVLDE +MKLDYVLGLK+EDFLERRLQTQVFK GLAKSI
Sbjct: 63 EDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSI 122
Query: 469 HHARILIRQRHIRVRKQVVNIPSLLCAWTLAAH-*LSLKSP 588
HHARILI+Q HIRVR+QVV++PS + H SL+SP
Sbjct: 123 HHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSP 163
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +1
Query: 217 KREVWRVKYTLA-RIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVL 393
KRE + + TLA + R+ A + L E DP R +L + G++ L+ +
Sbjct: 40 KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTSDT-LERIG 98
Query: 394 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSLL 543
+ F RRL + G+ +S+ A L+ Q H+R+ ++V P+ +
Sbjct: 99 KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFM 148
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 32.3 bits (70), Expect = 0.44
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 565 VLPESRRTIMMGCSQLACGHEYAFAGSKFWHDG 467
++P ++ + C + CG E+ F K WH+G
Sbjct: 140 IVPNGQKCPRIKCQRPGCGREFCFKCRKVWHEG 172
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 459 EVHPSCQNFDP------AKAYSCPQASCEHPIIIVRLDS 557
+VH QNFD AKA S PQ + EHP I RLD+
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDIRQRLDT 816
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 459 EVHPSCQNFDP------AKAYSCPQASCEHPIIIVRLDS 557
+VH QNFD AKA S PQ + EHP I RLD+
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDIRQRLDT 816
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 459 EVHPSCQNFDP------AKAYSCPQASCEHPIIIVRLDS 557
+VH QNFD AKA S PQ + EHP I RLD+
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDIRQRLDT 816
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 459 EVHPSCQNFDP------AKAYSCPQASCEHPIIIVRLDS 557
+VH QNFD AKA S PQ + EHP I RLD+
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDIRQRLDT 816
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 459 EVHPSCQNFDP------AKAYSCPQASCEHPIIIVRLDS 557
+VH QNFD AKA S PQ + EHP I RLD+
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDIRQRLDT 816
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 366 KTDETRLCAWSE---D*GLLGASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPI 536
KTDE A S+ D G +SA A V + P + S NFD K SC C PI
Sbjct: 107 KTDEIVESAESDSSSDTDYFGEASASAPVSN-PALTYLSGANFDNVKQPSCQMLGCTGPI 165
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 532 GCSQLACGHEYAFAGSKFWH 473
GC +L +EY FA K WH
Sbjct: 339 GCDELIFANEYTFAEEKSWH 358
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 558 QSPGAQ**WDVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIE 379
Q+PG W HNL + N PLP + + + + LR T L ++ N K I+
Sbjct: 115 QTPGLLSEWIYHNLFS--NNPLPTKQFHLFSAYVKCNKTSLR--TELVKIENTLEKDDID 170
Query: 378 FHLFFIQY 355
+F+ +Y
Sbjct: 171 ISVFYEKY 178
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 558 QSPGAQ**WDVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIE 379
Q+PG W HNL + N PLP + + + + LR T L ++ N K I+
Sbjct: 189 QTPGLLSEWIYHNLFS--NNPLPTKQFHLFSAYVKCNKTSLR--TELVKIENTLEKDDID 244
Query: 378 FHLFFIQY 355
+F+ +Y
Sbjct: 245 ISVFYEKY 252
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 558 QSPGAQ**WDVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIE 379
Q+PG W HNL + N PLP + + + + LR T L ++ N K I+
Sbjct: 225 QTPGLLSEWIYHNLFS--NNPLPTKQFHLFSAYVKCNKTSLR--TELVKIENTLEKDDID 280
Query: 378 FHLFFIQY 355
+F+ +Y
Sbjct: 281 ISVFYEKY 288
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 558 QSPGAQ**WDVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIE 379
Q+PG W HNL + N PLP + + + + LR T L ++ N K I+
Sbjct: 232 QTPGLLSEWIYHNLFS--NNPLPTKQFHLFSAYVKCNKTSLR--TELVKIENTLEKDDID 287
Query: 378 FHLFFIQY 355
+F+ +Y
Sbjct: 288 ISVFYEKY 295
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 558 QSPGAQ**WDVHNLLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIE 379
Q+PG W HNL + N PLP + + + + LR T L ++ N K I+
Sbjct: 240 QTPGLLSEWIYHNLFS--NNPLPTKQFHLFSAYVKCNKTSLR--TELVKIENTLEKDDID 295
Query: 378 FHLFFIQY 355
+F+ +Y
Sbjct: 296 ISVFYEKY 303
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -2
Query: 427 DDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHY--LRTISWGPS 293
+DA + Q+S A + + ++H V + E +GH+ + T++W PS
Sbjct: 252 EDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMAWHPS 298
>Z69884-1|CAA93748.1| 313|Caenorhabditis elegans Hypothetical
protein F31F6.1 protein.
Length = 313
Score = 27.9 bits (59), Expect = 9.5
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Frame = +1
Query: 199 EYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFE---GNALLRRLV-RIGVLDE 366
E G +R + LAR + R TL EKD +++F+ G ++R++ R G LD+
Sbjct: 106 ECGKMKSVSQFRTVFHLARCKLGNRMSPTLIEKDFEKIFQQYFGMLSMQRVLGRTGTLDQ 165
Query: 367 KQMKLDYVLGLKIEDFLERRLQTQV-FKAGLAKSIHHARIL 486
K + + E+ R L T V G + H R+L
Sbjct: 166 LFAKCSFEELMPAENV--RSLGTPVELSGGSVTVLPHRRVL 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,964,544
Number of Sequences: 27780
Number of extensions: 324693
Number of successful extensions: 880
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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