SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_F16
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    34   0.58 
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    34   0.58 
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem...    31   5.4  
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme...    31   5.4  
Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory eleme...    31   5.4  
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ...    31   5.4  
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.                31   5.4  
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p...    31   5.4  
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele...    31   5.4  
AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory ele...    31   5.4  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 34.3 bits (75), Expect = 0.58
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = -3

Query: 685 QVSGKRAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPF 506
           ++ G   GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P 
Sbjct: 574 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 633

Query: 505 YGSWP 491
           Y S P
Sbjct: 634 YLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 34.3 bits (75), Expect = 0.58
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = -3

Query: 685 QVSGKRAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPF 506
           ++ G   GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P 
Sbjct: 575 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 634

Query: 505 YGSWP 491
           Y S P
Sbjct: 635 YLSVP 639


>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
            binding protein 1 (UREB1) protein.
          Length = 4374

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
            binding protein 1 (UREB1) protein.
          Length = 4374

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory element
            binding protein 1 (UREB1) protein.
          Length = 1672

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
            protein.
          Length = 4374

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
          Length = 4374

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
            protein.
          Length = 4374

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
            binding protein 1 (UREB1) protein.
          Length = 4374

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


>AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory element
            binding protein 1 (UREB1) protein.
          Length = 1672

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 697  EKGGQVSG-KRAGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYGK 527
            EK G   G KR+  EQ+ A GS    T G+   I L G   + +  D   A    G    
Sbjct: 979  EKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGKSKI 1038

Query: 526  TPA 518
            TPA
Sbjct: 1039 TPA 1041


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,377,343
Number of Sequences: 237096
Number of extensions: 2755177
Number of successful extensions: 12155
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12151
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -