Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_F15
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 48 4e-05
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 48 4e-05
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 48 4e-05
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 48 4e-05
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 48 4e-05
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 46 1e-04
AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing p... 32 2.5
AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein. 32 2.5
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 342 HLSRLTTTKSLENGLVSARIXKDGKARKIVGCSCVVIKDFGEETPA 479
+L ++ K L + +I ++GK RK+VGCSCVV+KD+G+E+ A
Sbjct: 75 NLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 317 LCATKHQXPLVKVDNNKKLGEWAGLCK 397
LCA +HQ L+KVD+NKKLGEW GLCK
Sbjct: 68 LCA-EHQINLIKVDDNKKLGEWVGLCK 93
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 235 KLLXSGKQYXCVLAEHCXXAAYKQLVQALCNE 330
K L + + CVLA +C Y +LV+ALC E
Sbjct: 40 KALDKRQAHLCVLASNCDEPMYVKLVEALCAE 71
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 342 HLSRLTTTKSLENGLVSARIXKDGKARKIVGCSCVVIKDFGEETPA 479
+L ++ K L + +I ++GK RK+VGCSCVV+KD+G+E+ A
Sbjct: 75 NLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 317 LCATKHQXPLVKVDNNKKLGEWAGLCK 397
LCA +HQ L+KVD+NKKLGEW GLCK
Sbjct: 68 LCA-EHQINLIKVDDNKKLGEWVGLCK 93
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 235 KLLXSGKQYXCVLAEHCXXAAYKQLVQALCNE 330
K L + + CVLA +C Y +LV+ALC E
Sbjct: 40 KALDKRQAHLCVLASNCDEPMYVKLVEALCAE 71
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 342 HLSRLTTTKSLENGLVSARIXKDGKARKIVGCSCVVIKDFGEETPA 479
+L ++ K L + +I ++GK RK+VGCSCVV+KD+G+E+ A
Sbjct: 75 NLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 317 LCATKHQXPLVKVDNNKKLGEWAGLCK 397
LCA +HQ L+KVD+NKKLGEW GLCK
Sbjct: 68 LCA-EHQINLIKVDDNKKLGEWVGLCK 93
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 235 KLLXSGKQYXCVLAEHCXXAAYKQLVQALCNE 330
K L + + CVLA +C Y +LV+ALC E
Sbjct: 40 KALDKRQAHLCVLASNCDEPMYVKLVEALCAE 71
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 342 HLSRLTTTKSLENGLVSARIXKDGKARKIVGCSCVVIKDFGEETPA 479
+L ++ K L + +I ++GK RK+VGCSCVV+KD+G+E+ A
Sbjct: 75 NLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 317 LCATKHQXPLVKVDNNKKLGEWAGLCK 397
LCA +HQ L+KVD+NKKLGEW GLCK
Sbjct: 68 LCA-EHQINLIKVDDNKKLGEWVGLCK 93
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 235 KLLXSGKQYXCVLAEHCXXAAYKQLVQALCNE 330
K L + + CVLA +C Y +LV+ALC E
Sbjct: 40 KALDKRQAHLCVLASNCDEPMYVKLVEALCAE 71
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 342 HLSRLTTTKSLENGLVSARIXKDGKARKIVGCSCVVIKDFGEETPA 479
+L ++ K L + +I ++GK RK+VGCSCVV+KD+G+E+ A
Sbjct: 75 NLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 317 LCATKHQXPLVKVDNNKKLGEWAGLCK 397
LCA +HQ L+KVD+NKKLGEW GLCK
Sbjct: 68 LCA-EHQINLIKVDDNKKLGEWVGLCK 93
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 235 KLLXSGKQYXCVLAEHCXXAAYKQLVQALCNE 330
K L + + CVLA +C Y +LV+ALC E
Sbjct: 40 KALDKRQAHLCVLASNCDEPMYVKLVEALCAE 71
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 46.4 bits (105), Expect = 1e-04
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +3
Query: 342 HLSRLTTTKSLENGLVSARIXKDGKARKIVGCSCVVIKDFGEETPA 479
+L ++ K L + +I ++G RK+VGCSCVV+KD+G+E+ A
Sbjct: 75 NLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQA 120
Score = 44.4 bits (100), Expect = 6e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 329 KHQXPLVKVDNNKKLGEWAGLCK 397
+HQ L+KVD+NKKLGEW GLCK
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCK 93
>AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing
protein protein.
Length = 2386
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Frame = +2
Query: 383 AGLCKNXQGWQGKENCRLLLC---CHQRFRRG--NSSVG---CAQG 496
AGLC+ QGW G +CR+ LC C+ G N S+G CA+G
Sbjct: 971 AGLCRCPQGWAG-PHCRMALCPENCNAHTGAGTCNQSLGVCICAEG 1015
>AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein.
Length = 2785
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Frame = +2
Query: 383 AGLCKNXQGWQGKENCRLLLC---CHQRFRRG--NSSVG---CAQG 496
AGLC+ QGW G +CR+ LC C+ G N S+G CA+G
Sbjct: 1370 AGLCRCPQGWAG-PHCRMALCPENCNAHTGAGTCNQSLGVCICAEG 1414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,718,683
Number of Sequences: 237096
Number of extensions: 1162870
Number of successful extensions: 1930
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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