BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_F14
(974 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.035
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.19
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.33
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.43
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.75
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.3
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 27 5.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +2
Query: 698 PPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXA 826
P P P PP GG PP G GA PP PPP A
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 34.3 bits (75), Expect = 0.026
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 698 PPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPPP 850
PPPP TP P PP G P PP PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -3
Query: 789 PGXPXKXXXGGXPPPXXGGGVXGGXRXGGGGXPXEXPPXPXXXXGG 652
P P GG PPP GV G G P PP P GG
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGV------AGAGPPPPPPPPPAVSAGG 789
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +2
Query: 644 GPXPPXXXXGXGGFSXGXPPPPXRXPPXTPPPXXGGG 754
GP PP G G G PPPP PP PP GG
Sbjct: 760 GPPPPPPPPGVAG--AGPPPPP---PP--PPAVSAGG 789
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/48 (29%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +2
Query: 713 RXPPXTPPPXXGGGXPPXXXXXGXPGAV--XPPXXPPPXAPPXFXPPP 850
+ PP PP P P + PP PPP PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.035
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = +2
Query: 626 PXXPXXGPXPPXXXXGXGGFSXGXP-PPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXP 802
P P PP G S P P P P P P G PP G P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP---SGAPPVPAPSGIPPVPKP 1097
Query: 803 PXXPPPXAPPXFXPPP 850
PP P PP
Sbjct: 1098 SVAAPPVPKPSVAVPP 1113
Score = 33.9 bits (74), Expect = 0.035
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 692 GXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXP 844
G PP P P P G PP P A PP PP APP P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVP----KPAAGVPPVPPPSEAPPVPKP 1203
Score = 33.5 bits (73), Expect = 0.046
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 686 SXGXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPP 847
S PP P P P G PP P P PP PP PP
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 692 GXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPP 847
G PP P P P PP G P P PP P PP
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +2
Query: 704 PPXRXPPXTPP-PXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPP 847
PP P PP P PP G P P PP P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 29.9 bits (64), Expect = 0.57
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 686 SXGXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPPP 850
S G PP P P P P G P V PP PP P PP
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP-PVPPPSTAPPVPTPSAGLPP 1228
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Frame = +2
Query: 704 PPXRXPPXTPP-PXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPPP 850
PP P PP P PP G P P PP P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 692 GXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPP 847
G PP P P P G P P P PP P PP
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +2
Query: 704 PPXRXPPXTPP-PXXGGGXPPXXXXX-GXPGAVXPPXXPPPXAPPXFXPP 847
PP P PP P PP G P P PP PP PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +2
Query: 692 GXPP-PPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPPP 850
G PP PP P P P G PP P P PP P PP
Sbjct: 1187 GVPPVPPPSEAPPVPKP--SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 686 SXGXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPP 847
S PP P P P G P P P PP P PP
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 692 GXPPPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPPP 850
G PP P P P G P P P PP P PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 686 SXGXPP-PPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPP 847
S G PP PP P P P G PP P A PP P P P
Sbjct: 1204 SVGVPPVPPPSTAPPVPTP--SAGLPPVP----VPTAKAPPVPAPSSEAPSVSTP 1252
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +2
Query: 677 GGFSXGXP--PPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXP 844
GG + P PP R PP PP P + P PP APP P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 707 PXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXP 844
P + TPPP PP P PP PPP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPP---PSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 704 PPXRXPPXTPPPXXGGGXPPXXXXX-GXPGAVXPPXXPPPXAP 829
PP P PPP PP P + PP P AP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +2
Query: 719 PPXTPPPXXGGGXPPXXXXXGXPGAVXPPXX--PPPXAPPXFXPPP 850
P TPP PP P PP PPP APP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPP---PPPMSVPPPPSAPPMPAGPP 1728
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.19
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 8/80 (10%)
Frame = +2
Query: 635 PXXGPXPPXXXXGXGGFSXGXPPPPXRX------PPXTPPPXXGGGXPPXXXXXGXPGAV 796
P G P S G PPP PP PP G P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 797 XPPXXPPPXAPPXFXP--PP 850
PP PP PP P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPP 433
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 713 RXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPP 820
R PP PP G PP G + PP PPP
Sbjct: 310 RPPPPPPPSRRNRGKPP--IGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +2
Query: 647 PXPPXXXXGXGGFSXGXPPPPXRXPPXTPPP-XXGGGXPPXXXXXGXPGAVXPPXXPPPX 823
P PP G G PP PPP G P G PP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP----PQGRSAPPPPPPRS 368
Query: 824 APPXFXPPP 850
AP PP
Sbjct: 369 APSTGRQPP 377
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = +2
Query: 686 SXGXPPPPXRXPPXTPP---PXXGGGXPPXXXXXGXPGAVXPPXXPP-PXAPPXFXP 844
S PP P P PP P PP PP PP P AP P
Sbjct: 226 STSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 30.7 bits (66), Expect = 0.33
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Frame = +2
Query: 635 PXXGPXPPXXXX-GXGGFSXGXPP---PPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXP 802
P P PP G + PP P PP P P G P G PGA P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPG--YPAVPAMPGIPGATAP 557
Query: 803 PXXP 814
P P
Sbjct: 558 PGAP 561
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 701 PPPXRXPPXTPPPXXGGGXPPXXXXXGXPGAVXPPXXPPPXAPPXFXPPP 850
PP PP P P G P V P PP P F P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYP 543
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.43
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = -3
Query: 843 GXXXGGAXGGGXXGGXTAPGXPXKXXXGGXPPPXXGGGVXGGXRXGGGGXPXEXPPXPXX 664
G GG G G G PG GG G G G G GG P P
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGF----GGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 663 XXGGXGPXXGXXG 625
GG G G G
Sbjct: 240 FGGGPGGFGGGLG 252
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.75
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 786 PXPSXPXXXPPXXPPPXXPPPP 851
P P P PP PPP PPPP
Sbjct: 11 PPPPPPGFEPPSQPPP--PPPP 30
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 785 PGAVXPPXXPPPXAPPXFXPPP 850
PG PP PP PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 698 PPPPXRXPPXTPPP 739
PPPP PP PPP
Sbjct: 13 PPPPGFEPPSQPPP 26
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 791 AVXPPXXPPPXAPPXFXPP 847
++ P PPP PP F PP
Sbjct: 3 SLPPGNPPPPPPPPGFEPP 21
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 791 AVXPPXXPPPXAPPXFXPPP 850
A PP PPP PP PP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPP 21
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 785 PGAVXPPXXPPPXAPPXFXPPP 850
P PP PPP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Frame = +2
Query: 698 PPPPXRXPPXTPPPXXGGGXPPXXXXXGXP-GAVXPPXXPPPXAPPXFXPPP 850
PPPP PP P G PP P A P PPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPP 240
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 786 PXPSXPXXXPPXXPPPXXPP 845
P + P PP PPP PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 851 RGGGXXXGGPXGGGXXGGGRXRG 783
RGG GG G G GGGR RG
Sbjct: 453 RGGFGGRGGFGGRGGFGGGRGRG 475
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 9/58 (15%)
Frame = +2
Query: 701 PPPXRXP-PXTPPPXXGGGXPPXXXXXGXPGAVXPPXXP------PPXAP--PXFXPP 847
PP P P PPP P P ++ PP P PP AP P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 759 PPXGXXXGXPXPSXPXXXPPXXPPPXXPPPP 851
PP P PS P PPP P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -3
Query: 891 GGKXXXRXXXXXXXGG-GXXXGGAXGGGXXGGXTAPGXPXKXXXGGXPPPXXGGGVXGGX 715
GG R GG G GGA GGG G G G GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Query: 714 R 712
+
Sbjct: 72 K 72
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = -3
Query: 891 GGKXXXRXXXXXXXGGGXXXGGAXGGGXXGGXTAPGXPXKXXXGGXPPPXXGGGVXGGXR 712
GG+ R GG GG GG GG + GG G G G R
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG----ARGGRGGRGGARGGRGGSSGGR 64
Query: 711 XGGGG 697
G G
Sbjct: 65 GGAKG 69
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 179 FFFXXXFFXFXXXXXXFXXFFXFFFFFXFXFFF 81
FF+ + F FF FFF F F F F
Sbjct: 53 FFYPKRNWWFFIKMRYLSFFFEFFFLFSFAFAF 85
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,933,224
Number of Sequences: 5004
Number of extensions: 28720
Number of successful extensions: 283
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 501293686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -