Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_F13
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127740-1|BAC87109.1|  218|Homo sapiens protein ( Homo sapiens ...    33   1.8  
AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76 ...    32   3.1  

>AK127740-1|BAC87109.1|  218|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45840 fis, clone NTONG2004829. ).
          Length = 218

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -1

Query: 486 EGGGVLLDVQGGPCGAPRPCARCSASTVPKPPW-PCRSRLRALPWRLLAKALSCCSTDS 313
           EGGG      G P   P P +       P+P   P RS  R+ P  L+++ ++CCS +S
Sbjct: 34  EGGGRGAGDPGAPAVVPAPVS------APRPASSPARSESRSPPLTLISRHITCCSCES 86


>AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76
           (expressed in testis) variant protein.
          Length = 222

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 441 APRPCARCSASTVPKPPWPCRSRLRALPWR 352
           +P P A  +  T   PPWPC S +    WR
Sbjct: 162 SPTPAAPAARPTGRPPPWPCTSAVPMASWR 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,860,678
Number of Sequences: 237096
Number of extensions: 1443578
Number of successful extensions: 5496
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5493
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)