Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_F13
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical p...    30   1.8  
AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kin...    30   1.8  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kinase
           2 protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 69  SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 242
           +P   S A S S+ HH     S  SL  +  G   + A+  S L+QGHR P  G      
Sbjct: 69  APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122

Query: 243 NNSLTRSPSQRTHRTSA 293
            N+LTRS  Q +   S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 456 GGPCGAPRPCARCSASTVPKPP 391
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,662,081
Number of Sequences: 27780
Number of extensions: 204768
Number of successful extensions: 811
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)