Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_F11
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical pr...    53   2e-07
Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AF098993-2|AAC67466.1|  549|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z19155-3|CAA79558.2|  812|Caenorhabditis elegans Hypothetical pr...    32   0.62 
U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF024500-1|AAB70364.1|  339|Caenorhabditis elegans Hypothetical ...    29   5.7  

>Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical
           protein C34C6.5b protein.
          Length = 423

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +1

Query: 598 ILILLNPKSGPGKARELFQTKVAPILQEAEVPYDLHVTKYAQFAREFVRTR-NVYAWRTI 774
           +L+ +NP SG GK+ E F   V P L ++ + Y++ VT     AR  + T+ ++  +  +
Sbjct: 38  LLVFINPNSGTGKSLETFANTVGPKLDKSLIRYEVVVTTGPNHARNVLMTKADLGKFNGV 97

Query: 775 VAVGGDXVLFEILNGMFERLD 837
           + + GD ++FE LNG+  R D
Sbjct: 98  LILSGDGLVFEALNGILCRED 118


>Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical
           protein C34C6.5a protein.
          Length = 473

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +1

Query: 598 ILILLNPKSGPGKARELFQTKVAPILQEAEVPYDLHVTKYAQFAREFVRTR-NVYAWRTI 774
           +L+ +NP SG GK+ E F   V P L ++ + Y++ VT     AR  + T+ ++  +  +
Sbjct: 88  LLVFINPNSGTGKSLETFANTVGPKLDKSLIRYEVVVTTGPNHARNVLMTKADLGKFNGV 147

Query: 775 VAVGGDXVLFEILNGMFERLD 837
           + + GD ++FE LNG+  R D
Sbjct: 148 LILSGDGLVFEALNGILCRED 168


>AF098993-2|AAC67466.1|  549|Caenorhabditis elegans Hypothetical
           protein T10B11.2 protein.
          Length = 549

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
 Frame = +1

Query: 592 KKILILLNPKSGPGKARELFQTKV-APILQEAEVPYDLHVTKYAQFAREFVRTRNVYAWR 768
           K I+I +NP  G GKA+++F+  V A       + Y + +T+ A  AR+++       W 
Sbjct: 165 KNIIIFINPFGGNGKAQKIFKDNVDAFFWLTPGLRYKVVLTERANHARDYIVEMPPEQWS 224

Query: 769 TI---VAVGGDXVLFEILNGMFER 831
            I   V+VGGD +  E+L+G   R
Sbjct: 225 AIDGLVSVGGDGLFNELLSGALLR 248


>Z19155-3|CAA79558.2|  812|Caenorhabditis elegans Hypothetical
           protein F54G8.2 protein.
          Length = 812

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 574 VPPLND-KKILILLNPKSGPGKARELFQTKVAPILQEAEVPYDLHVTKYAQFAREFVRTR 750
           V P ND + +L+L+NPKSG  +  ++ Q K   +L   +V YDL  T      + F   +
Sbjct: 419 VSPSNDCRPLLVLVNPKSGGKQGVKILQ-KFEYLLNPRQV-YDLSKTGPEPGLQLFSTLK 476

Query: 751 NVYAWRTIVAVGGDXVLFEILNGM 822
           N      I+  GGD  +  +L  M
Sbjct: 477 NC----NILVCGGDGTIGWVLESM 496


>U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical
           protein K06A1.6 protein.
          Length = 937

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/81 (28%), Positives = 40/81 (49%)
 Frame = +1

Query: 598 ILILLNPKSGPGKARELFQTKVAPILQEAEVPYDLHVTKYAQFAREFVRTRNVYAWRTIV 777
           +L+ +NPKSG  K  +   T +  +L   +V +D+   K  +F  E    R V     I+
Sbjct: 419 LLVFVNPKSGGNKGSKALHT-LCWLLNPRQV-FDITSLKGPKFGLEMF--RKVVTQLRIL 474

Query: 778 AVGGDXVLFEILNGMFERLDW 840
             GGD  +  +L+ + + L+W
Sbjct: 475 VCGGDGTVGWVLSTL-DNLNW 494


>AF024500-1|AAB70364.1|  339|Caenorhabditis elegans Hypothetical
           protein K06H6.5 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 433 FVSKYMSKCTNTH*CHFRPDRHCS 362
           FVS ++ KC NT+ C+   D HC+
Sbjct: 166 FVSFFVDKCINTNSCYGCRDLHCA 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,496,213
Number of Sequences: 27780
Number of extensions: 406782
Number of successful extensions: 922
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)