Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_F08
(982 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.003
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.035
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 0.32
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.76
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.76
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.76
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 29 1.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 5.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.3
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.046
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 558 PPPPPPXXGXGXXXXXXPPXPPP 626
PPPPPP G PP PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.061
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 275 PPPPXXGGXPPPPNXKXNXLXXXXPPPPP 361
PPP G PPPP PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 275 PPPPXXGG-XPPPPNXKXNXLXXXXPPPPP 361
PP P GG PPPP PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 6/48 (12%)
Frame = +2
Query: 857 PPPPPP------PPPXXXKKXXXXXXXXXXXXPPPPXXTXXXXXPPPP 982
PPPPPP P P PPPP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.43
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 676 GXXXXPPPPXXXGGGXXPPPP 738
G PPPP G G PPPP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPP 780
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 558 PPPPPPXXGXGXXXXXXPPXPPPXXXXXXXXXXXXXXGXGGXXXXPPXP 704
PPPPPP P PPP G G PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect = 0.76
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 732 GGXXPPPXXXGXGGXXXXPPPP 667
GG PPP G G PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect(2) = 0.003
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 857 PPPPPPPPP 883
PPPPPPPPP
Sbjct: 775 PPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 269 GAPPPPXXGGXPPPPNXKXNXLXXXXPPPPPXGGG 373
G PPPP PPPP PPPP G
Sbjct: 759 GGPPPP-----PPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 676 GXXXXPPPPXXXGGGXXPPPP 738
G PPPP G PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect(2) = 0.48
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 589 PXPXXGGGGGGXFXXXXKXPPPPPPPP 509
P P G G G PPPPPPPP
Sbjct: 764 PPPPPGVAGAGP-------PPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 6/48 (12%)
Frame = +2
Query: 857 PPPPP------PPPPXXXKKXXXXXXXXXXXXPPPPXXTXXXXXPPPP 982
PPPPP P P PPPP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect(2) = 0.003
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 674 GGXXXXPPXPXXXGGGXXPPP 736
GG PP P G G PPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 21.0 bits (42), Expect(2) = 0.48
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 718 PPPPXGXGGXXXXPPXP 668
PPP GG PP P
Sbjct: 752 PPPAPIMGGPPPPPPPP 768
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.57
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 558 PPPPPPXXGXGXXXXXXPPXPP 623
PPPPPP G PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 296 GXPPPPNXKXNXLXXXXPPPPPXGG 370
G PPPP PPPPP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
Frame = +2
Query: 857 PP--PPPPPPPXXXKK 898
PP PPPPPPP KK
Sbjct: 20 PPSQPPPPPPPGYVKK 35
Score = 26.6 bits (56), Expect(2) = 0.035
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 26.6 bits (56), Expect(2) = 0.21
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 857 PPPPPPPP 880
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 26.6 bits (56), Expect(2) = 0.17
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 860 PPPPPPPP 883
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 25.8 bits (54), Expect(2) = 0.035
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 529 PPPPPPPXXXKXXK 488
PPPPPPP K K
Sbjct: 24 PPPPPPPGYVKKRK 37
Score = 23.4 bits (48), Expect(2) = 0.17
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 935 PPPPXXTXXXXXPPPP 982
PPPP PPPP
Sbjct: 13 PPPPGFEPPSQPPPPP 28
Score = 23.0 bits (47), Expect(2) = 0.21
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 935 PPPPXXTXXXXXPPPP 982
PPPP PPPP
Sbjct: 12 PPPPPGFEPPSQPPPP 27
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 857 PPPPPPPPPXXXKKXXXXXXXXXXXXPPPPXXTXXXXXPPPP 982
PPPPPPP PPPP PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.5 bits (68), Expect = 0.19
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 6/65 (9%)
Frame = +1
Query: 559 PPPP------RPXGGXGXXXXXXPPXPPXXXXXXXXXXXXXXXGXGXXXXPPPPXXXGGG 720
PPPP +P G G PP PP G PPP G
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 721 XXPPP 735
PPP
Sbjct: 374 RQPPP 378
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 9/71 (12%)
Frame = +3
Query: 549 KXXPPPPP---------PXXGXGXXXXXXPPXPPPXXXXXXXXXXXXXXGXGGXXXXPPX 701
K PPPPP P G G PP PPP G PP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 702 PXGGGGXXXPP 734
G PP
Sbjct: 368 SAPSTGRQPPP 378
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 857 PPPPPPPPPXXXKKXXXXXXXXXXXXPPPP 946
PPPPPPP K PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 275 PPPPXXGGXPPPPNXKXNXLXXXXPPPPP 361
PPPP PP + PPPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/56 (23%), Positives = 14/56 (25%)
Frame = -1
Query: 679 PPXPXXXXXXXXXXXXXXGGGXGGXXXXXXPXPXXGGGGGGXFXXXXKXPPPPPPP 512
PP P G P P G + PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.2 bits (55), Expect = 7.1
Identities = 25/118 (21%), Positives = 25/118 (21%), Gaps = 10/118 (8%)
Frame = +3
Query: 558 PPPPPPXXGXGXXXXXXP------PXPPPXXXXXXXXXXXXXXGXGGXXXXPPXP----X 707
PPPPPP P P PPP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 708 GGGGXXXPPPXXXXXXXXXXXXXXXXXXXPXXPXXXPXXXPXXXXXXXXXPPXPPPPP 881
G PP P P P PP PP P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +2
Query: 797 PXXPXXPXXXXXXXXXXXXXPPPPPPPPP 883
P P P P PPP PPP
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 22.2 bits (45), Expect(2) = 2.5
Identities = 10/37 (27%), Positives = 12/37 (32%)
Frame = +2
Query: 869 PPPPPXXXKKXXXXXXXXXXXXPPPPXXTXXXXXPPP 979
PP PP + PPPP + PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.4 bits (48), Expect(3) = 0.32
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 857 PPPPPPPP 880
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 23.4 bits (48), Expect(3) = 0.32
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 860 PPPPPPPP 883
PPPPPP P
Sbjct: 5 PPPPPPAP 12
Score = 20.6 bits (41), Expect(3) = 0.32
Identities = 7/16 (43%), Positives = 7/16 (43%)
Frame = +2
Query: 935 PPPPXXTXXXXXPPPP 982
PPPP P PP
Sbjct: 7 PPPPAPAPAAAAPAPP 22
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.5 bits (63), Expect = 0.76
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 857 PPPPPPPPP 883
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.76
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 857 PPPPPPPPP 883
PPPPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 857 PPPPPPPPP 883
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect = 0.76
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 857 PPPPPPPPP 883
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 PPPPPPPPPXXXKK 898
PPPPPPPP KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 278 PPPXXGGXPPPPNXKXNXLXXXXPPPPP 361
PPP PPPP+ PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 5.3
Identities = 29/141 (20%), Positives = 30/141 (21%)
Frame = +1
Query: 559 PPPPRPXGGXGXXXXXXPPXPPXXXXXXXXXXXXXXXGXGXXXXPPPPXXXGGGXXPPPP 738
PPPP PP P G PPP G PPPP
Sbjct: 208 PPPPMHH----KPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 739 XXXXXXXXXXTXXXXXXXXPXXPXXPPXXXXXXXXXXXXPPPXPPPPPXXKXKXXXXXXX 918
P P PPP P
Sbjct: 264 MHHEPGEHMPPPPMHHEPGEHMPPPP----MHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 319
Query: 919 XXXXXPPPPXXNXXXXXSPPP 981
PPPP + PPP
Sbjct: 320 PGEHMPPPPMHHEPGEHMPPP 340
Score = 26.2 bits (55), Expect = 7.1
Identities = 22/102 (21%), Positives = 23/102 (22%)
Frame = +1
Query: 676 GXXXXPPPPXXXGGGXXPPPPXXXXXXXXXXTXXXXXXXXPXXPXXPPXXXXXXXXXXXX 855
G PPP G PPPP P P
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP----MHHEPGEHM 259
Query: 856 PPPXPPPPPXXKXKXXXXXXXXXXXXPPPPXXNXXXXXSPPP 981
PPP P PPPP + PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 498 FXXXGGGGGGGGXFXXXKXXPPPPPPXXG 584
F G GGG G F PPP P G
Sbjct: 180 FHHRGHNGGGFGGFGGGSGGPPPGPGGFG 208
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 532 PPPPPPPP 509
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 857 PPPPPPPP 880
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 860 PPPPPPPP 883
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,405,037
Number of Sequences: 5004
Number of extensions: 42932
Number of successful extensions: 622
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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