Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_F07
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 62 4e-10
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 62 7e-10
Z72503-3|CAE17724.1| 217|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006830-3|AAP13735.1| 348|Caenorhabditis elegans Serpentine re... 31 1.4
AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical ... 29 4.3
AC024755-10|ABS19458.1| 245|Caenorhabditis elegans Hypothetical... 28 7.5
Z54327-9|CAA91122.2| 839|Caenorhabditis elegans Hypothetical pr... 28 10.0
AF099914-4|AAC68765.1| 236|Caenorhabditis elegans Hypothetical ... 28 10.0
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 73.3 bits (172), Expect = 2e-13
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Frame = +3
Query: 210 DYKVHLDAGKEDCYFQYVQ--PGATFYASYQVLKGGDGMCGFAVRHPNGKIVHPYEWRQS 383
D+ V + AGK C+FQ V T YQV+ GGD F + H I+ + +
Sbjct: 24 DFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGGDLNINFMILH-GANILKQDQLKVD 82
Query: 384 AEYADQSSSGGYYAVCIDNQFSRFAGKLV--NLYLSVIRYDMWE-----------KYAKE 524
+ + + G Y VC DN FS + K+V ++L ++ E + +
Sbjct: 83 GSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLDEADLSAMARTDSDLSAK 142
Query: 525 VEELDMNIKNFTSSIQFVERNINDILQYQYHSRARESRDYNLLLDNNIYVLRWSIIQIIA 704
+ EL + I F ++ N+N + +Q RA E+RD ++ N V WS++ +
Sbjct: 143 MNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDRVTFWSVVHTLV 202
Query: 705 VTATGTLQVYFLRKLFEVKDNSSK 776
+ +QV+ +R LFE K
Sbjct: 203 MVGVAGVQVFMIRSLFEENSKIGK 226
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 62.5 bits (145), Expect = 4e-10
Identities = 37/183 (20%), Positives = 75/183 (40%)
Frame = +3
Query: 213 YKVHLDAGKEDCYFQYVQPGATFYASYQVLKGGDGMCGFAVRHPNGKIVHPYEWRQSAEY 392
Y +H+DA +E C+F + G ++V +GG + P+ K ++ E S ++
Sbjct: 19 YFIHVDANEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKF 78
Query: 393 ADQSSSGGYYAVCIDNQFSRFAGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFTSSIQ 572
+ G Y C N+ S K V + + A ++ N K ++
Sbjct: 79 TFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNAK-LEEMVR 137
Query: 573 FVERNINDILQYQYHSRARESRDYNLLLDNNIYVLRWSIIQIIAVTATGTLQVYFLRKLF 752
+ + + Q + RE N+ + N V+ W+ + + Q+++L++ F
Sbjct: 138 ELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFF 197
Query: 753 EVK 761
EV+
Sbjct: 198 EVR 200
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 61.7 bits (143), Expect = 7e-10
Identities = 43/187 (22%), Positives = 78/187 (41%)
Frame = +3
Query: 201 VTMDYKVHLDAGKEDCYFQYVQPGATFYASYQVLKGGDGMCGFAVRHPNGKIVHPYEWRQ 380
++++ L C+++ ++ +QV+ GG + PNGK+++ +Q
Sbjct: 16 LSIELTFELPDNANQCFYEDLKKDVDTVFEFQVVTGGHYDVDLIIEDPNGKVLYKDTKKQ 75
Query: 381 SAEYADQSSSGGYYAVCIDNQFSRFAGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFT 560
++ G Y C N+FS F+ K+V + + + ++N+
Sbjct: 76 YDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHAAVTQGAHAMTQLENYA 135
Query: 561 SSIQFVERNINDILQYQYHSRARESRDYNLLLDNNIYVLRWSIIQIIAVTATGTLQVYFL 740
+I R I+D YQ H R RE+ + N V+ WS+ Q V G QV+ L
Sbjct: 136 VAIGDKLRTIDD---YQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIGIGQVFLL 192
Query: 741 RKLFEVK 761
+ F K
Sbjct: 193 KSFFNDK 199
>Z72503-3|CAE17724.1| 217|Caenorhabditis elegans Hypothetical
protein C26C6.9 protein.
Length = 217
Score = 42.7 bits (96), Expect = 3e-04
Identities = 39/174 (22%), Positives = 65/174 (37%)
Frame = +3
Query: 246 CYFQYVQPGATFYASYQVLKGGDGMCGFAVRHPNGKIVHPYEWRQSAEYADQSSSGGYYA 425
CY++ ++ G + F V P+G A ++ G Y
Sbjct: 44 CYYEPLETGMILNIGMRPTFDTVYPMQFRVTSPSGDFSDWASGDGDAHMEHNTTENGPYE 103
Query: 426 VCIDNQFSRFAGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFTSSIQFVERNINDILQ 605
+C+ ++R K +NLYL + E K K+ +SI I I
Sbjct: 104 ICV---YTRRPMK-INLYLQFYNPEKMENSLKTFFAHHQISKDIQNSIMASTHRIYKIYY 159
Query: 606 YQYHSRARESRDYNLLLDNNIYVLRWSIIQIIAVTATGTLQVYFLRKLFEVKDN 767
+ RD L L N+ ++ ++I+ I QVY++RKLF + N
Sbjct: 160 HLKFYNQMVVRDEALQLQNSEFIQNYNIVFCIVAIIITISQVYYVRKLFRIDPN 213
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical
protein R09H10.5 protein.
Length = 1603
Score = 31.1 bits (67), Expect = 1.1
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Frame = +3
Query: 495 YDMWEKYAKE---VEELDMNIKNFTSSI--QFVERNINDILQYQYHSRARESRDYNLLLD 659
YD+ Y E E+L+ + F+ + F E ++D Y+ H + L L
Sbjct: 35 YDIHPDYYNEKSFTEKLNKVSERFSQVVGPDFKEFFVHD---YKIHGQDTAVFHARLTLV 91
Query: 660 NNIYVLRWSIIQIIAVTATGTLQVYFLRK-LFEVK-DNSSKTRI 785
+++ V R II + AT +Q+YFLRK FEV+ D+ S+ R+
Sbjct: 92 SSLTVSRQDIID--QIVATDDVQIYFLRKNEFEVQGDSVSRFRV 133
>AC006830-3|AAP13735.1| 348|Caenorhabditis elegans Serpentine
receptor, class w protein3 protein.
Length = 348
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 351 KIVHPYEWRQSAEYADQSSSGGYYAVCIDNQFSRFAGKLVNLY 479
+I+ PY+W + + Y V + N+F+ KLV++Y
Sbjct: 166 RIIRPYDWDYDCDGNEIPLPETRYGVLVPNEFAAIQSKLVSVY 208
>AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical
protein ZK185.4 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 78 KHGIQDVAFVYSDNIIYLLVLSHEGDGLSSSAAPWYENLPAVTMDYKVHLDAGKEDCYFQ 257
+HGI V F YS ++ LL + + S + ++ N P + Y H+ CYF
Sbjct: 147 EHGIWHVCFFYSFGVVALLFFI--SNTVCHSQSLYFLN-PYGRISY--HVKIVISICYFL 201
Query: 258 YVQPGATFYASY 293
ATFYA Y
Sbjct: 202 SAPAIATFYALY 213
>AC024755-10|ABS19458.1| 245|Caenorhabditis elegans Hypothetical
protein Y34B4A.2 protein.
Length = 245
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 486 VIRYDMWEKYAKEVEELDMNIKNFTSSIQFVERNI 590
V+RY M + A VEE ++ K++ + I+ V++ I
Sbjct: 48 VVRYQMAQDLAIRVEEKEVKCKSYKTQIEMVQKLI 82
>Z54327-9|CAA91122.2| 839|Caenorhabditis elegans Hypothetical
protein C26D10.4 protein.
Length = 839
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 EKYAKEVEELDMNIKNFTSSIQFVERNIN--DILQYQYHSRARESRDYNLLLD 659
EK ++ V++ K Q + + DI++YQY SR+Y LLD
Sbjct: 272 EKVSENVQDRTNARKQIFKKFQDFKGRVEVLDIIEYQYKKFPEHSRNYRQLLD 324
>AF099914-4|AAC68765.1| 236|Caenorhabditis elegans Hypothetical
protein C40A11.3 protein.
Length = 236
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 534 LDMNIKNFTSSIQFVERNINDI--LQYQYHSRARESRDYNLLLDNNIYVLRWSIIQIIAV 707
+D + K+F + F+ D+ L+ + RE++ Y LLD +Y+ W + I V
Sbjct: 51 IDRSPKHFDVILNFLRDGDVDLPELEKEVKEVRREAQFY--LLDGLVYLCNWKLNTAIHV 108
Query: 708 TATGTLQVYFLRK 746
T ++ F RK
Sbjct: 109 LKNDTEKLEFQRK 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,333,552
Number of Sequences: 27780
Number of extensions: 461449
Number of successful extensions: 1153
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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