Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_F07
         (869 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    25   0.91 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    25   1.2  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    25   1.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   8.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   8.5  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +3

Query: 591 NDILQYQYHSRARESRDYNLLLDNNIYVLRWSIIQIIAVTATGTLQVY 734
           N+  +Y Y++    + +YN   +NN   L ++II I  +     + +Y
Sbjct: 326 NNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIY 373


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 456 AGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFTSSIQFVERN 587
           A K+VN YL   R   WE+ + + +      K +   +QF + N
Sbjct: 83  ANKVVN-YLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKNN 125


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 456 AGKLVNLYLSVIRYDMWEKYAKEVEELDMNIKNFTSSIQFVERN 587
           A K+VN YL   R   WE+ + + +      K +   +QF + N
Sbjct: 83  ANKVVN-YLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKNN 125


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 437 QPILKVCWKIS*SVLVGDQIRYVGEV 514
           Q I+ +CW      L+G  I Y G+V
Sbjct: 86  QNIIDICWITMVYSLLGIIIAYTGDV 111


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = +3

Query: 558 TSSIQFVERNINDILQYQYHSRARESRDYNL 650
           T + Q     ++++L + +HS+     DY++
Sbjct: 478 TGTSQMYAEKLSELLGHAFHSQVLSMSDYDI 508


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 249 YFQYVQPGATF 281
           +F YVQP ATF
Sbjct: 134 FFIYVQPSATF 144


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 348 GKIVHPYEWRQSAEYADQSSSGGYYAVCIDNQFSR 452
           G+++ PY     A Y D S     Y + ID +F R
Sbjct: 105 GRLLQPYPDWSWANYKDCSGIVSAYKIAID-KFDR 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,717
Number of Sequences: 438
Number of extensions: 5349
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)