Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_F04
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 113 2e-25
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 113 2e-25
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 113 2e-25
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 113 2e-25
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 112 3e-25
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 112 3e-25
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 112 3e-25
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 112 3e-25
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 7.6
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 7.6
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 113 bits (272), Expect = 2e-25
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +1
Query: 337 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 516
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 517 VVGVNLDPYD 546
VVGVN + YD
Sbjct: 137 VVGVNHEKYD 146
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/62 (70%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 317
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 318 FL 323
+L
Sbjct: 66 YL 67
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLT RL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 113 bits (272), Expect = 2e-25
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +1
Query: 337 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 516
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 517 VVGVNLDPYD 546
VVGVN + YD
Sbjct: 137 VVGVNHEKYD 146
Score = 95.1 bits (226), Expect = 6e-20
Identities = 43/62 (69%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 317
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 318 FL 323
+L
Sbjct: 66 YL 67
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLT RL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 113 bits (272), Expect = 2e-25
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +1
Query: 337 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 516
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 517 VVGVNLDPYD 546
VVGVN + YD
Sbjct: 137 VVGVNHEKYD 146
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/62 (70%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 317
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 318 FL 323
+L
Sbjct: 66 YL 67
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLT RL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 113 bits (272), Expect = 2e-25
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +1
Query: 337 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 516
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 517 VVGVNLDPYD 546
VVGVN + YD
Sbjct: 137 VVGVNHEKYD 146
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/62 (70%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 317
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 318 FL 323
+L
Sbjct: 66 YL 67
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLT RL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 112 bits (270), Expect = 3e-25
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 331 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 510
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 511 MFVVGVNLDPYDPS 552
M+VVGVN + YD S
Sbjct: 135 MYVVGVNHEKYDAS 148
Score = 100 bits (239), Expect = 2e-21
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 311
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 312 DGFL 323
FL
Sbjct: 64 GDFL 67
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLTVRL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 112 bits (270), Expect = 3e-25
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 331 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 510
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 511 MFVVGVNLDPYDPS 552
M+VVGVN + YD S
Sbjct: 135 MYVVGVNHEKYDAS 148
Score = 100 bits (239), Expect = 2e-21
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 311
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 312 DGFL 323
FL
Sbjct: 64 GDFL 67
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLTVRL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 112 bits (270), Expect = 3e-25
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 331 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 510
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 511 MFVVGVNLDPYDPS 552
M+VVGVN + YD S
Sbjct: 135 MYVVGVNHEKYDAS 148
Score = 100 bits (239), Expect = 2e-21
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 311
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 312 DGFL 323
FL
Sbjct: 64 GDFL 67
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLTVRL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 112 bits (270), Expect = 3e-25
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 331 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 510
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 511 MFVVGVNLDPYDPS 552
M+VVGVN + YD S
Sbjct: 135 MYVVGVNHEKYDAS 148
Score = 100 bits (239), Expect = 2e-21
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 311
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 312 DGFL 323
FL
Sbjct: 64 GDFL 67
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLTVRL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 112 bits (270), Expect = 3e-25
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 331 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 510
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 511 MFVVGVNLDPYDPS 552
M+VVGVN + YD S
Sbjct: 135 MYVVGVNHEKYDAS 148
Score = 100 bits (239), Expect = 2e-21
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 311
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 312 DGFL 323
FL
Sbjct: 64 GDFL 67
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 729 AQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRL 872
A QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +VSVVDLTVRL
Sbjct: 208 AGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRL 255
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 569 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 727
NASCTTNCLAPLAKVI+DNF I+EGLM DGPSGKLWRDGRG
Sbjct: 155 NASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRG 207
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 2.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 146 NQWIWPHWPFGAP 184
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 238 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 113
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 238 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 113
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,182,737
Number of Sequences: 27780
Number of extensions: 412744
Number of successful extensions: 947
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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