Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_E24
(1472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.22
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.68
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.68
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 2.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 6.3
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXXPPPPPXP 38
PP G P P P P G PPPPP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXX---PPPPPXP 38
PP P G P P P P G PPPPP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 100 GFPXPHPXPGXGXXPPPPPXP 38
G P P P PG PPPPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXXPPPPPXP 38
PP G P P P P G PPPPP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXX---PPPPPXP 38
PP P G P P P P G PPPPP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 100 GFPXPHPXPGXGXXPPPPPXP 38
G P P P PG PPPPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXXPPPPPXP 38
PP G P P P P G PPPPP P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXX---PPPPPXP 38
PP P G P P P P G PPPPP P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 100 GFPXPHPXPGXGXXPPPPPXP 38
G P P P PG PPPPP P
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPP 360
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.68
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 124 PXPXXXXXGF-PXPHPXPGXGXXPPPPPXP 38
P P G P P P P G PPPPP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.68
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 124 PXPXXXXXGF-PXPHPXPGXGXXPPPPPXP 38
P P G P P P P G PPPPP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXXPPPPPXP 38
PP P P P P P PPPPP P
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = -2
Query: 100 GFPXPHPXP--GXGXXPPPPPXP 38
G P P P P G G PPPPP P
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = -2
Query: 100 GFPXPHPXP--GXGXXPPPPPXP 38
G P P P P G G PPPPP P
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = -2
Query: 100 GFPXPHPXP--GXGXXPPPPPXP 38
G P P P P G G PPPPP P
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPPP 240
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 130 SPPXPXXXXXGFPXPHPXPGXGXXPPPPPXP 38
+PP P P P P PPPPP P
Sbjct: 466 APPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 496
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXXPPPP 47
PP P G P P P G G PPPP
Sbjct: 84 PPPPPMFAGGIPPPPPMMG-GIPPPPP 109
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 130 SPPXPXXXXXGFPXPHPXPGXGXXPPPPPXP 38
+PP P P P P PPPPP P
Sbjct: 473 APPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 503
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 127 PPXPXXXXXGFPXPHPXPGXGXXPPPPP 44
PP P P P P P PPPPP
Sbjct: 549 PPPPREPTPREPTPEPEPVREPTPPPPP 576
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 29.1 bits (62), Expect = 8.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 130 SPPXPXXXXXGFPXPHPXPGXGXXPPPPP 44
+PP P G+ P P P PPPP
Sbjct: 39 APPPPVGAGVGYAPPPPRPYGATYAPPPP 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,554,457
Number of Sequences: 27780
Number of extensions: 138557
Number of successful extensions: 1610
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4225111268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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