Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_E12
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   186   2e-47
Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    68   8e-12
Z68301-4|CAA92623.2|  536|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF106575-15|AAC78164.2|  350|Caenorhabditis elegans Serpentine r...    29   5.9  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   7.8  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  186 bits (452), Expect = 2e-47
 Identities = 82/107 (76%), Positives = 99/107 (92%)
 Frame = +3

Query: 174 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 353
           MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T 
Sbjct: 1   MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60

Query: 354 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 494
           +LT+QNR A+I VVPSAA+LI++ LKEPPRDRKK KN+KHNG+++++
Sbjct: 61  KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVD 107



 Score = 75.8 bits (178), Expect = 4e-14
 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = +1

Query: 457 RKISNTTATSPLK--DVVGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 630
           +K+ N      L    ++ IA+IMR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I
Sbjct: 93  KKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDII 152

Query: 631 DDINSGALTI 660
           + I +G + I
Sbjct: 153 ESIANGEIEI 162


>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = +1

Query: 520 MRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 660
           MR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 1   MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47


>Z68301-4|CAA92623.2|  536|Caenorhabditis elegans Hypothetical
           protein W01B6.5 protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
 Frame = +3

Query: 372 RQAQIAVVPSAAALIIRALKEPPRD-----RKKQKNIKHNGNISLERCSRHCEDHEKQIN 536
           R+  ++V+ +    +IR   +P +      +K Q ++K  GN+S E+C++  ++ E+++ 
Sbjct: 116 REDLMSVLKNVGDFLIRTSVQPNKHEVEKMKKNQADVKVLGNLSREKCAKKEKEKEEKLA 175

Query: 537 G 539
           G
Sbjct: 176 G 176


>AF106575-15|AAC78164.2|  350|Caenorhabditis elegans Serpentine
           receptor, class w protein91 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -2

Query: 598 YIQLTVLCQESLLLSQKGTGPLICFS*SSQCRLHLSREMLPLC 470
           YI +  +C ++LLL    T   ICF  SSQ R + ++++L +C
Sbjct: 309 YINVDAIC-DTLLLWNASTNCFICFLMSSQYR-NTAKKLLKVC 349


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 596 HPTDCAVPRISFTEPERYRAIDL 528
           HPT CAV    F +P +Y  IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209,819
Number of Sequences: 27780
Number of extensions: 354704
Number of successful extensions: 889
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)