BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_E11
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 159 2e-39
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 151 7e-37
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 142 3e-34
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 57 2e-08
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 57 2e-08
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 54 2e-07
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 50 2e-06
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 48 1e-05
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 46 3e-05
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 38 0.011
08_02_1284 - 25864049-25864202,25864690-25864880,25865053-258658... 32 0.52
07_03_1197 + 24719746-24720081,24721726-24721976,24722065-247222... 31 0.92
06_03_0449 + 20907491-20910146,20910313-20910782 31 1.2
06_03_0207 - 17927753-17927983,17928077-17928178,17928273-179285... 29 4.9
11_03_0175 + 11241151-11241157,11241253-11241425,11241619-112417... 29 6.5
11_06_0342 - 22523610-22524332 28 8.5
10_04_0016 + 7601796-7601999,7602495-7602543,7603140-7603165,760... 28 8.5
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 159 bits (387), Expect = 2e-39
Identities = 74/177 (41%), Positives = 119/177 (67%)
Frame = +3
Query: 102 AYSTAKMPSTGFTPKEYKGPTYEQLEHLKSKHMPPAIPNSYKKPVLLHQGHMQWLFDHEG 281
A S MP P+ Y G + +++ + + + ++ Y+KP+ + +G MQ+L+D G
Sbjct: 45 ARSPPVMPPFEHRPRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENG 104
Query: 282 KRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTNLYRHPRIYEYIEKLSSKLPDDL 461
KRYLD FGG+VTVS G+ HP + A+ EQ L+ HTT +Y + I E+ E L+SK+P +L
Sbjct: 105 KRYLDCFGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTIYLNQPIVEFAEALASKMPGNL 164
Query: 462 NVVYLVNSGTEANDLATILAKAYTGNLDVISLQTSYHGYNSSLMGLSATQSYRMNLP 632
VVY VNSGTEAN+LA ++A+ Y+GNL++I+L+ +YHG ++ +GL+ Q+++ +P
Sbjct: 165 KVVYFVNSGTEANELAMLMARLYSGNLNMIALRNAYHGGSAGTIGLTGLQTWKYPIP 221
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 631 PVPPG-FYHAAHPDPYRGSWGGCRDSISQVAGACSCPGECVSTEKYIHQLDELLGNSVPA 807
P+P G +H +PDPYRG++G D+++ Y +++E + N +
Sbjct: 219 PIPQGEIHHVMNPDPYRGTFGS--DAVA-----------------YAKEVEEQI-NYGTS 258
Query: 808 GRVXAFFAESIQGAGGVVQFPKG 876
GRV F AE+ QG GG V+ G
Sbjct: 259 GRVAGFIAETFQGVGGAVELAPG 281
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 151 bits (366), Expect = 7e-37
Identities = 68/176 (38%), Positives = 112/176 (63%)
Frame = +3
Query: 102 AYSTAKMPSTGFTPKEYKGPTYEQLEHLKSKHMPPAIPNSYKKPVLLHQGHMQWLFDHEG 281
A + +M P Y GP+ ++ +++ + P++ + Y KP+ + +G MQ+LFD G
Sbjct: 21 AVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKPLNIVEGKMQYLFDERG 80
Query: 282 KRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTNLYRHPRIYEYIEKLSSKLPDDL 461
+RYLD F G+ TV G+ HP + A+ Q + H+T LY + I ++ E L+SK+P DL
Sbjct: 81 RRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNHAIADFAEALASKMPGDL 140
Query: 462 NVVYLVNSGTEANDLATILAKAYTGNLDVISLQTSYHGYNSSLMGLSATQSYRMNL 629
VV+ NSGTEAN+LA ++A+ YTG+ D+ISL+ SYHG + MG +A ++++ ++
Sbjct: 141 KVVFFTNSGTEANELAIMMARLYTGSHDIISLRNSYHGNAAGTMGATAQKNWKFSV 196
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 628 SPVPPGFYHAAHPDPYRGSWGGCRDSISQVAGACSCPGECVSTEKYIHQLDELLGNSVPA 807
S V G +HA +PDPYRG++G EKY + E++
Sbjct: 195 SVVQSGVHHAVNPDPYRGAFGS-------------------DAEKYARDVQEIIEFGT-T 234
Query: 808 GRVXAFFAESIQGAGGVVQFPKG 876
G+V F +E+IQG GG+V+ G
Sbjct: 235 GQVAGFISEAIQGVGGIVELSPG 257
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 142 bits (344), Expect = 3e-34
Identities = 70/183 (38%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Frame = +3
Query: 102 AYSTA-KMPSTGFTPKEYKGPTYEQLEHLKSKHMPPAIPNSYKKPVLL-------HQGHM 257
A++ A KMP +TP Y GP E++ +++ + P++ + Y +P ++ +
Sbjct: 38 AFAAAPKMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRPWAYRHPRFGSYRDYH 97
Query: 258 QWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTNLYRHPRIYEYIEKL 437
++LFD +G+RYLD FGG+ TV G+ HP + A+ Q I H+T LY + I ++ E L
Sbjct: 98 KYLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADFAEAL 157
Query: 438 SSKLPDDLNVVYLVNSGTEANDLATILAKAYTGNLDVISLQTSYHGYNSSLMGLSATQSY 617
++K+P DL VV+ NSGTEAN+LA ++A+ YTG D+ISL+ YHG + MG +A ++
Sbjct: 158 AAKMPGDLKVVFFTNSGTEANELALMIARLYTGCHDIISLRNGYHGNAAGTMGATAQCNW 217
Query: 618 RMN 626
+ N
Sbjct: 218 KFN 220
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +1
Query: 643 GFYHAAHPDPYRGSWGGCRDSISQVAGACSCPGECVSTEKYIHQLDELLGNSVPAGRVXA 822
G +HA +PDPYRG++G EKY + E++ GRV
Sbjct: 222 GVHHALNPDPYRGAFGS-------------------DGEKYARDVQEIIDFGT-TGRVGG 261
Query: 823 FFAESIQGAGGVVQFPKG 876
F +E+IQG GG+V+ G
Sbjct: 262 FISEAIQGVGGIVELAPG 279
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 56.8 bits (131), Expect = 2e-08
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Frame = +3
Query: 228 KPVLLHQGHMQWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTNLYRH 407
+P++ ++D +G Y+D G +G++ +NAAL I+ + T+ +
Sbjct: 85 QPIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAAL---IETLKKGTS-FGA 140
Query: 408 PRIYEYI--EKLSSKLPDDLNVVYLVNSGTEANDLATILAKAYTGNLDVISLQTSYHGYN 581
P + E + E + S +P + +V VNSGTEA A L +A+TG ++ + YHG+
Sbjct: 141 PCVLENVLAEMVISAVPS-IEMVRFVNSGTEACMGALRLVRAFTGREKILKFEGCYHGHA 199
Query: 582 SSLMGLSATQSYRMNLPGTAGILSRGTSRSV 674
S + + + + LP + G+ TS ++
Sbjct: 200 DSFLVKAGSGVATLGLPDSPGVPKGATSETL 230
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 56.8 bits (131), Expect = 2e-08
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Frame = +3
Query: 231 PVLLHQGHMQWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLI--WHT-TNLY 401
P+++ + +++D +GK+YLD G+ ++G S P+L A EQ+ + +H+ N
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRT 570
Query: 402 RHPRIYEYIEKLSSKLPDDLNVVYLVNSGTEANDLATILAKAYTGNL------DVISLQT 563
P + E LS ++ V+ NSG+EAND L Y L I+
Sbjct: 571 TKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIARSK 630
Query: 564 SYHG---YNSSLMGLSATQSYRMNLP 632
SYHG ++SL GL A + +LP
Sbjct: 631 SYHGSTLISASLSGLPALHQ-KFDLP 655
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +3
Query: 261 WLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLI--WHT-TNLYRHPRIYEYIE 431
+++D +G +YLD G+ ++G S P+L A +Q++ + +H+ N P + E
Sbjct: 59 YVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPPLDLAEE 118
Query: 432 KLSSKLPDDLNVVYLVNSGTEANDLATILAKAYTGNL 542
+S ++ V+ NSG+EAND L Y L
Sbjct: 119 LISMFTAKEMGKVFFTNSGSEANDSQVKLVWYYNNAL 155
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 811 RVXAFFAESIQGAGGVVQFPK 873
++ AF AE + GAGGV+ PK
Sbjct: 715 KIAAFIAEPVMGAGGVIPPPK 735
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Frame = +3
Query: 231 PVLLHQGHMQWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLI--WHT-TNLY 401
P+++ + +++D GK+Y+D G+ + ++G + P+L A +Q++ + +H+ N
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRT 181
Query: 402 RHPRIYEYIEKLSSKLPDDLNVVYLVNSGTEANDLATILAKAYTGNL------DVISLQT 563
P + E LS ++ ++ NSG+EAND L Y L I+
Sbjct: 182 TKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNALGRPNKKKFIARSK 241
Query: 564 SYHG---YNSSLMGLSATQSYRMNLP 632
SYHG ++SL GL A + +LP
Sbjct: 242 SYHGSTLVSASLSGLPALHQ-KFDLP 266
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Frame = +3
Query: 234 VLLHQGHMQWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTNL-YRHP 410
V+L G L+D +G+ YLD+ G+ ++G++ P AA+ Q + H +N+ Y P
Sbjct: 83 VVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNVQYTVP 142
Query: 411 RIYEYIEKLSSKLPDDLNVVYLVNSGTEANDLATILAKAY--------TGNLDVISLQTS 566
++ + + D V+ N+GTEAN+ A A+ + + +S
Sbjct: 143 QVALAKRLVEASFADR---VFFANTGTEANEAAIKFARKFQRVARPDGDAPTEFMSFTNC 199
Query: 567 YHGYNSSLMGLSATQSYR 620
+HG + L++ YR
Sbjct: 200 FHGRTMGSLALTSKVQYR 217
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/105 (25%), Positives = 52/105 (49%)
Frame = +3
Query: 216 NSYKKPVLLHQGHMQWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTN 395
N + PV+ +G + D EG +Y+D V+ G+ HPK+ ALKEQ + + ++
Sbjct: 53 NYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRALKEQAERLTLSSR 112
Query: 396 LYRHPRIYEYIEKLSSKLPDDLNVVYLVNSGTEANDLATILAKAY 530
+ + + + E L+S ++ +N+G E + A L + +
Sbjct: 113 AFYNDKFPIFAEYLTSMF--GYEMMLPMNTGAEGVETAIKLVRKW 155
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Frame = +3
Query: 234 VLLHQGHMQWLFDHEGKRYLDLFGGVVTVSVGNSHPKLNAALKEQIDLIWHTTNL-YRHP 410
V+L G L+D +G+ YLD+ G+ ++G++ P AA+ Q + H +N+ Y P
Sbjct: 87 VVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNVQYTVP 146
Query: 411 R--IYEYIEKLSSKLPDD--LNVVYLVNSGTEANDLATILAKAY--------TGNLDVIS 554
+ + +L + + V+ N+GTEAN+ A A+ Y + +S
Sbjct: 147 QASLERVTPTAHHRLVEASFADRVFFANTGTEANEAAIKFARKYQRVARPDGDAPTEFMS 206
Query: 555 LQTSYHGYNSSLMGLSATQSYR 620
+HG + L++ YR
Sbjct: 207 FTNCFHGRTMGSLALTSKVQYR 228
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 37.9 bits (84), Expect = 0.011
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Frame = +3
Query: 324 VGNSHPKLNAALKEQIDLIWHTTNLYRH---PRIYEYIEKLSSKLPDDLNVVYLVNSGTE 494
VG S P+L A EQ++ + + + H P + E +S ++ V+ NSG+E
Sbjct: 22 VGGSEPRLVKAATEQLNKLPFYHSFWNHTTRPSLDLAKELISMFTAREMGKVFFTNSGSE 81
Query: 495 ANDLATILAKAYTGNL------DVISLQTSYHG---YNSSLMGLSATQ 611
AND + Y L ++IS SYHG ++SL G+ Q
Sbjct: 82 ANDSQVKIVWYYNNALGRPKKKNIISRTQSYHGTTFISASLSGILICQ 129
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 739 GECVSTEKYIHQLDELLGNSVPAGRVXAFFAESIQGAGGVVQFPK 873
G +S + ++++ G ++ AF AE + GAGGV+ PK
Sbjct: 142 GASISLSAFFDEINDFCGR-----QIAAFIAEPVIGAGGVILPPK 181
>08_02_1284 -
25864049-25864202,25864690-25864880,25865053-25865895,
25865953-25866896,25867052-25867190,25867259-25867334,
25867666-25867788,25867869-25867952,25868145-25868235,
25868448-25868532,25868620-25868784,25868872-25868928,
25870141-25870302
Length = 1037
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 700 DSISQVAGACSCPGECVSTEKYIHQLDELLGNSVPAGR---VXAFFAESIQGAGG 855
D QV + S P +CV + HQ+ +L GN +P + + A S+ AGG
Sbjct: 625 DLQQQVINSQSAPQQCVQQKVQSHQVQDLTGNVIPNSKSDIATSMGASSLHVAGG 679
>07_03_1197 +
24719746-24720081,24721726-24721976,24722065-24722233,
24722339-24722683
Length = 366
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 625 TSPVPPGF-YHAAHPDPYRGSWGGCRDSISQVAGACSCPGECVSTEKYIHQLDE 783
T VP GF Y + D G IS AC C G VS +KYI+ +D+
Sbjct: 56 TIRVPEGFDYELYNRDDINRILGPRASCISFKDSACRCFGYMVSKKKYIYTIDD 109
>06_03_0449 + 20907491-20910146,20910313-20910782
Length = 1041
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +3
Query: 396 LYRHP---RIYEYIEKLSSKLPDDLNVVYLVNSGTEANDLATILAKAYTGNLDVISLQTS 566
++RH R+Y Y LS +LP ++ LV +N L +++ + GNL +SL
Sbjct: 271 VFRHQKLERLYLYENSLSGELPRNVTTANLVEIDLSSNQLGGEISEDF-GNLKNLSLLFL 329
Query: 567 YHGYNSSLMGLSATQSYRMNLPGTAGILSRGTSRSVPRELGR 692
Y +N + A+ NL + S +P ELG+
Sbjct: 330 Y--FNKVTGAIPASIGRLPNLTDLR-LFGNELSGELPPELGK 368
>06_03_0207 -
17927753-17927983,17928077-17928178,17928273-17928502,
17929257-17929343,17931263-17931389,17931485-17931628,
17931920-17931985,17932136-17932254,17932437-17932551,
17932626-17932732,17932969-17932983,17933810-17933900,
17934528-17934671,17934750-17934980,17935093-17935248,
17935330-17935483,17935973-17936117,17936241-17936355
Length = 792
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 76 DDCAMWLAGRIVQLKCPPPGLHPKSIRAQHTNN 174
D C +LA R+V+ KCP G + ++ R N
Sbjct: 142 DTCQRFLADRLVEGKCPTEGCNYEAARGDQCEN 174
>11_03_0175 +
11241151-11241157,11241253-11241425,11241619-11241702,
11242895-11242936,11243407-11243517,11245384-11245575,
11245776-11245859,11246162-11246259,11246670-11246859
Length = 326
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 876 SLRELHHSTSTLDRFREERXYSAGWYRIT*ELVELMNVFFGANAFAGTRARAGHL 712
SLR+LHHST+ L +F + A W + + AN G ++G +
Sbjct: 162 SLRKLHHSTAHLPQFL-RWSFEAAWVLALSYFIAYLETLAIANKICGNAFQSGQI 215
>11_06_0342 - 22523610-22524332
Length = 240
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 251 SHAVALRPRGQKILGPVRRSRYCLS--WK*SSEAKRSSQRTNR 373
SH + +PRG+ +L +RR+RY ++ W+ A R NR
Sbjct: 27 SHRLGGQPRGEGLLSGLRRARYAVATLWERRGIAARVVDLKNR 69
>10_04_0016 +
7601796-7601999,7602495-7602543,7603140-7603165,
7603334-7603339,7603496-7603570,7603880-7603933
Length = 137
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 811 RVXAFFAESIQGAGGVVQFPK 873
++ AF AE + GAGGV+ PK
Sbjct: 95 QIAAFIAEPVMGAGGVIAPPK 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,919,495
Number of Sequences: 37544
Number of extensions: 727816
Number of successful extensions: 2250
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2242
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -