Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_E10
         (1274 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37 pro...    33   1.7  
L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37 pro...    33   1.7  
D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37 pro...    33   1.7  
CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.                33   1.7  
BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.        33   1.7  
BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37 p...    33   1.7  
AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37 p...    33   1.7  
AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens ...    31   6.8  

>S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 189 RCGXSSXHIQKSKCAXCAYP 248
           RCG  + H+QKS C  C YP
Sbjct: 21  RCGSKAYHLQKSTCGKCGYP 40


>AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22184 fis, clone HRC00983. ).
          Length = 616

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 22/70 (31%), Positives = 24/70 (34%)
 Frame = +2

Query: 398 PXTHISKXPXSCSXXXPPXHXXTPXPHSXSXGFFTPPLXXSPXDX*XXPLAALXXSSPXE 577
           P       P  C    PP    TP P + S    TPP   +P      PL  L  S P  
Sbjct: 48  PHLETPPCPAPCPLQAPPSPLTTPPPETPS-SIATPP-PQAPPALASPPLQGL-PSPPLS 104

Query: 578 PXLVPXPTGP 607
           P   P P  P
Sbjct: 105 PLATPPPQAP 114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,433,707
Number of Sequences: 237096
Number of extensions: 832548
Number of successful extensions: 1876
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18275348360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)