Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_E10
         (1274 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    40   0.004
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    37   0.035

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 186 ERCGXSSXHIQKSKCAXCAYPXXK 257
           +RCG SS HIQK +CA C YP  K
Sbjct: 20  KRCGKSSFHIQKKRCASCGYPDAK 43


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 36.7 bits (81), Expect = 0.035
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 186 ERCGXSSXHIQKSKCAXCAYPXXK 257
           +RCG SS HIQK +CA C Y   K
Sbjct: 20  KRCGKSSFHIQKKRCASCGYQDAK 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,779,489
Number of Sequences: 27780
Number of extensions: 106896
Number of successful extensions: 218
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)